RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 BANPQ8N9N5 519 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 LDHAL6BQ9BYZ2 381 aaPredicted RBP18.18■□□□□ 0.5
PCDH1-201ENST00000287008 PDP1Q9P0J1 537 aaPredicted RBP18.18■□□□□ 0.5
PCDH1-201ENST00000287008 RBM7Q9Y580 266 aaKnown RBP18.18■□□□□ 0.5
PCDH1-201ENST00000287008 BACE2Q9Y5Z0 518 aa18.18■□□□□ 0.5
PCDH1-201ENST00000287008 ADAMDEC1O15204 470 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 MLLT3P42568 568 aaPredicted RBP18.17■□□□□ 0.5
PCDH1-201ENST00000287008 MED22Q15528 200 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 HPS6Q86YV9 775 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 ZHX1-C8orf76Q96EF9 292 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 NECTIN4Q96NY8 510 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 PNPLA3Q9NST1 481 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 ZNF282Q9UDV7 671 aaPredicted RBP18.17■□□□□ 0.5
PCDH1-201ENST00000287008 PAIP2BQ9ULR5 123 aaKnown RBP18.17■□□□□ 0.5
PCDH1-201ENST00000287008 LIN7AO14910 233 aaPredicted RBP18.17■□□□□ 0.5
PCDH1-201ENST00000287008 MAGEB3O15480 346 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 GRID2O43424 1007 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 TLX3O43711 291 aaPredicted RBP18.17■□□□□ 0.5
PCDH1-201ENST00000287008 TGFB1P01137 390 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 BMPR1AP36894 532 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 HERVK_113P63132 956 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 RAPSNQ13702 412 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 PDK3Q15120 406 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 TAB1Q15750 504 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 DDI2Q5TDH0 399 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 TAS1R3Q7RTX0 852 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 GKN2Q86XP6 184 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 NEK7Q8TDX7 302 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 SGIP1Q9BQI5 828 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 ERVK-6Q9BXR3 956 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 CRNNQ9UBG3 495 aaPredicted RBP18.17■□□□□ 0.5
PCDH1-201ENST00000287008 C10orf71Q711Q0 1435 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 A0A1W2PRB8 838 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 GSC2O15499 205 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 FABP3P05413 133 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 CHRNGP07510 517 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 PCDH1Q08174 1060 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 TRIM25Q14258 630 aaKnown RBP18.17■□□□□ 0.5
PCDH1-201ENST00000287008 ABHD13Q7L211 337 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 RASGRP3Q8IV61 690 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 TMEM209Q96SK2 561 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 TAC3Q9UHF0 121 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 SPATA2Q9UM82 520 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 STON1Q9Y6Q2 735 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 H0YC42 278 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 IMPDH1P20839 514 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 CSTF2P33240 577 aaKnown RBP eCLIP18.17■□□□□ 0.5
PCDH1-201ENST00000287008 NFKB2Q00653 900 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 GPRC6AQ5T6X5 926 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 OR10A6Q8NH74 314 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 SLCO2A1Q92959 643 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 RGMAQ96B86 450 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 C1orf74Q96LT6 269 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 NDC1Q9BTX1 674 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 BCL2L14Q9BZR8 327 aa18.17■□□□□ 0.5
PCDH1-201ENST00000287008 WBP4O75554 376 aaKnown RBP18.16■□□□□ 0.5
PCDH1-201ENST00000287008 OR5F1O95221 314 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 HTRA3P83110 453 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 ARMC3Q5W041 872 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 PAOXQ6QHF9 649 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 LMX1AQ8TE12 382 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 ZNF641Q96N77 438 aaPredicted RBP18.16■□□□□ 0.5
PCDH1-201ENST00000287008 MRPL39Q9NYK5 338 aaKnown RBP18.16■□□□□ 0.5
PCDH1-201ENST00000287008 SOCS5O75159 536 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 PRPS1L1P21108 318 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 MLIPQ5VWP3 458 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 FRG2Q64ET8 278 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 SLC34A3Q8N130 599 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 KAT2AQ92830 837 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 SMARCD2Q92925 531 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 FRG2BQ96QU4 278 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 C8orf4Q9NR00 106 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 EHD3Q9NZN3 535 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 FADS3Q9Y5Q0 445 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 AP4B1Q9Y6B7 739 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 ATP5A1P25705 553 aaKnown RBP18.16■□□□□ 0.5
PCDH1-201ENST00000287008 CLCN7P51798 805 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 ERVK-8P63133 956 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 EIF4HQ15056 248 aaKnown RBP18.16■□□□□ 0.5
PCDH1-201ENST00000287008 SLC44A4Q53GD3 710 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 DAPK2Q9UIK4 370 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 SSR3Q9UNL2 185 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 SLC22A14Q9Y267 594 aa18.16■□□□□ 0.5
PCDH1-201ENST00000287008 RIIAD1A6NNX1 92 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 PAK4O96013 591 aaPredicted RBP18.15■□□□□ 0.5
PCDH1-201ENST00000287008 CBSLP0DN79 551 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 HOXC12P31275 282 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 CBSP35520 551 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 NRG3P56975 720 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 RPP38P78345 283 aaKnown RBP18.15■□□□□ 0.5
PCDH1-201ENST00000287008 NFATC2Q13469 925 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 MTX3Q5HYI7 312 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 PIK3R6Q5UE93 754 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 SLC8B1Q6J4K2 584 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 KBTBD2Q8IY47 623 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 PIGXQ8TBF5 258 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 ROPN1LQ96C74 230 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 SAP18O00422 153 aaKnown RBP18.15■□□□□ 0.5
PCDH1-201ENST00000287008 ZBTB22O15209 634 aa18.15■□□□□ 0.5
PCDH1-201ENST00000287008 ECI2O75521 394 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms