RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 ERVK-18Q9QC07 812 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 AASSQ9UDR5 926 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 ZNF490Q9ULM2 529 aaPredicted RBP12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 PCDHB14Q9Y5E9 798 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 TMEM247A6NEH6 219 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 AREL1O15033 823 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 VNN2O95498 520 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 ANGPTL1O95841 491 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 GLUD1P00367 558 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 FTH1P02794 183 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 UGT2B4P06133 528 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 CYP4B1P13584 511 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 CTPS1P17812 591 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 FMO3P31513 532 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 HPCAL1P37235 193 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 MAP2K4P45985 399 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 GNPDA1P46926 289 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 KPNA1P52294 538 aaPredicted RBP12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 LSM3P62310 102 aaKnown RBP12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 MAD2L1Q13257 205 aaPredicted RBP12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 LAPTM4AQ15012 233 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 OXA1LQ15070 435 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 PHKG1Q16816 387 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 RNF19BQ6ZMZ0 732 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 C16orf59Q7L2K0 433 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 GLB1L3Q8NCI6 653 aaPredicted RBP12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 OR7A2PQ8NGA2 310 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 OR52E4Q8NGH9 312 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 NDNFQ8TB73 568 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 EID2BQ96D98 161 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 MTFMTQ96DP5 389 aaKnown RBP12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 FAM120BQ96EK7 910 aaKnown RBP12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 FAM193BQ96PV7 902 aaPredicted RBP12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 BOCQ9BWV1 1114 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 NACA2Q9H009 215 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 TRIT1Q9H3H1 467 aaKnown RBP12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 WWOXQ9NZC7 414 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 OPTCQ9UBM4 332 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 PKP3Q9Y446 797 aa12.96□□□□□ -0.33
SLC28A1-201ENST00000286749 TRBV5-3A0A0A0MS03 114 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 SLC28A1O00337 649 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 SLC16A6O15403 523 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 ULK1O75385 1050 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 DNAJB5O75953 348 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 GSNP06396 782 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 ASGR1P07306 291 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 CCDC159P0C7I6 412 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 ZDHHC11BP0C7U3 371 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 MYCLP1P12525 358 aaPredicted RBP12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 FUT4P22083 530 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 RYKP34925 604 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 CA5AP35218 305 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 SLC11A2P49281 568 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 IL1RL1Q01638 556 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 CES5AQ6NT32 575 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 FAM151BQ6UXP7 276 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 RSPO2Q6UXX9 243 aaPredicted RBP12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 NCCRP1Q6ZVX7 275 aaPredicted RBP12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 CHPFQ8IZ52 775 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 RGL4Q8IZJ4 473 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 BARD1Q99728 777 aaKnown RBP12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 MROQ9BYG7 248 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 FAM126AQ9BYI3 521 aaPredicted RBP12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 GPR63Q9BZJ6 419 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 WDR12Q9GZL7 423 aaKnown RBP12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 CLPBQ9H078 707 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 MAGIXQ9H6Y5 334 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 IL17CQ9P0M4 197 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 PCDHB9Q9Y5E1 797 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 NUP214P35658 2090 aaPredicted RBP12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 FAM220BPB1ANY3 271 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 SYN3O14994 580 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 CLDN11O75508 207 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 GABARAPO95166 117 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 GJB5O95377 273 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 B3GALT4O96024 378 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 RPLP2P05387 115 aaKnown RBP12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 PHC1P78364 1004 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 DUSP4Q13115 394 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 ZNF177Q13360 481 aaPredicted RBP12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 SIM2Q14190 667 aaPredicted RBP12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 ADPRMQ3LIE5 342 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 RNF219Q5W0B1 726 aaPredicted RBP12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 LRRC8DQ7L1W4 858 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 HIPK1Q86Z02 1210 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 CLDN19Q8N6F1 224 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 RORBQ92753 470 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 ERLEC1Q96DZ1 483 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 GPR62Q9BZJ7 368 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 CD244Q9BZW8 370 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 RIBC2Q9H4K1 309 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 SPC25Q9HBM1 224 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 C1orf109Q9NX04 203 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 DNMT3LQ9UJW3 386 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 INTS6Q9UL03 887 aaKnown RBP12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 OARD1Q9Y530 152 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 PCDHB1Q9Y5F3 818 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 PCDHGA4Q9Y5G9 962 aa12.95□□□□□ -0.34
SLC28A1-201ENST00000286749 ILVBLA1L0T0 632 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms