RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 LATS1O95835 1130 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 CSTBP04080 98 aaKnown RBP8.59□□□□□ -1.03
NIPBL-201ENST00000282516 PIRTP0C851 137 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 GOT1P17174 413 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 MAP4K3Q8IVH8 894 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 FEM1AQ9BSK4 669 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 NDC1Q9BTX1 674 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 C19orf12Q9NSK7 152 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 PRR5-ARHGAP8B1AHC4 643 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 BUD23O43709 281 aaKnown RBP8.59□□□□□ -1.03
NIPBL-201ENST00000282516 SSX4O60224 188 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 ATP6AP2O75787 350 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 IFNA10P01566 189 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 PRNPP04156 253 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 IL7RP16871 459 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 WNT3AP56704 352 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 ARHGAP8P85298 464 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 TARDBPQ13148 414 aaKnown RBP eCLIP8.59□□□□□ -1.033e-8■■■■□ 26.4
NIPBL-201ENST00000282516 BCL2A1Q16548 175 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 PITRM1Q5JRX3 1037 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 RBM48Q5RL73 367 aaKnown RBP8.59□□□□□ -1.03
NIPBL-201ENST00000282516 SYCE2Q6PIF2 218 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 CENPSQ8N2Z9 138 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 LIX1Q8N485 282 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 ABHD5Q8WTS1 349 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 NCSTNQ92542 709 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 SPIN1Q9Y657 262 aaPredicted RBP8.59□□□□□ -1.03
NIPBL-201ENST00000282516 SLIT1O75093 1534 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 IFNA4P05014 189 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 HK1P19367 917 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 CRISP1P54107 249 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 RAB5BP61020 215 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 CLIP4Q8N3C7 705 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 LGMNQ99538 433 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 UNC93B1Q9H1C4 597 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 SERINC1Q9NRX5 453 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 ZNF358Q9NW07 568 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 PACSIN3Q9UKS6 424 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 TESMINQ9Y4I5 508 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 NOTOA8MTQ0 251 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 ADORA2AP29274 412 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 ENPP2Q13822 863 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 LY6KQ17RY6 165 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 TSEN2Q8NCE0 465 aaKnown RBP8.59□□□□□ -1.03
NIPBL-201ENST00000282516 EZH1Q92800 747 aaPredicted RBP8.59□□□□□ -1.03
NIPBL-201ENST00000282516 SMARCD2Q92925 531 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 PIWIL1Q96J94 861 aaKnown RBP8.59□□□□□ -1.03
NIPBL-201ENST00000282516 AGAP2Q99490 1192 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 MYNNQ9NPC7 610 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 ZNF175Q9Y473 711 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 ZNF451Q9Y4E5 1061 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 NR2E3Q9Y5X4 410 aa8.59□□□□□ -1.03
NIPBL-201ENST00000282516 hCG_1818297A0A087WSY0 165 aa8.59□□□□□ -1.04
NIPBL-201ENST00000282516 A0A1W2PRQ8 180 aa8.59□□□□□ -1.04
NIPBL-201ENST00000282516 E7EQ34 232 aa8.59□□□□□ -1.04
NIPBL-201ENST00000282516 ACOX3O15254 700 aa8.59□□□□□ -1.04
NIPBL-201ENST00000282516 PGLSO95336 258 aa8.59□□□□□ -1.04
NIPBL-201ENST00000282516 TPSB2P20231 275 aa8.59□□□□□ -1.04
NIPBL-201ENST00000282516 IGFBP4P22692 258 aa8.59□□□□□ -1.04
NIPBL-201ENST00000282516 CRISP3P54108 245 aa8.59□□□□□ -1.04
NIPBL-201ENST00000282516 SMAD3P84022 425 aaKnown RBP8.59□□□□□ -1.04
NIPBL-201ENST00000282516 TPSAB1Q15661 275 aa8.59□□□□□ -1.04
NIPBL-201ENST00000282516 TMEM199Q8N511 208 aa8.59□□□□□ -1.04
NIPBL-201ENST00000282516 JAGN1Q8N5M9 183 aa8.59□□□□□ -1.04
NIPBL-201ENST00000282516 GPR151Q8TDV0 419 aa8.59□□□□□ -1.04
NIPBL-201ENST00000282516 HTATIP2Q9BUP3 242 aa8.59□□□□□ -1.04
NIPBL-201ENST00000282516 ZNF282Q9UDV7 671 aaPredicted RBP8.59□□□□□ -1.04
NIPBL-201ENST00000282516 FBXW2Q9UKT8 454 aa8.59□□□□□ -1.04
NIPBL-201ENST00000282516 PCCBP05166 539 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 C8GP07360 202 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 PRPS2P11908 318 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 FAPQ12884 760 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 PDSS1Q5T2R2 415 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 NT5DC1Q5TFE4 455 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 ABHD13Q7L211 337 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 SAMD7Q7Z3H4 446 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 CLNKQ7Z7G1 428 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 DNAJB8Q8NHS0 232 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 BTN2A3PQ96KV6 586 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 C7orf26Q96N11 449 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 OR5B12Q96R08 314 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 ADAM2Q99965 735 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 ASPNQ9BXN1 380 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 TMEM134Q9H6X4 195 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 ADARB2Q9NS39 739 aaKnown RBP8.58□□□□□ -1.04
NIPBL-201ENST00000282516 PARPBPQ9NWS1 579 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 HIF3AQ9Y2N7 669 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 FAM86B1E9PN63 330 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 TBX1O43435 398 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 RAB36O95755 333 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 ZNF16P17020 682 aaPredicted RBP8.58□□□□□ -1.04
NIPBL-201ENST00000282516 EPS8L1Q8TE68 723 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 SEC14L1Q92503 715 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 TMLHEQ9NVH6 421 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 NWD1Q149M9 1564 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 HTR3EA5X5Y0 456 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 TMEM150CB9EJG8 249 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 ATP6V1G1O75348 118 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 TGFB2P61812 414 aa8.58□□□□□ -1.04
NIPBL-201ENST00000282516 MFSD8Q8NHS3 518 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms