RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 HPRP00739 348 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 S100A1P23297 94 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 CYP2C18P33260 490 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 LIPAP38571 399 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 RGRP47804 291 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 PPP5CP53041 499 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 TRAF3Q13114 568 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 DPP10Q8N608 796 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 ATG16L2Q8NAA4 619 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 BRSK1Q8TDC3 778 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 ZBTB18Q99592 522 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 EGFL8Q99944 293 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 INPP5KQ9BT40 448 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 CSNK1G1Q9HCP0 422 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 SNX8Q9Y5X2 465 aa12.66□□□□□ -0.38
COL8A1-202ENST00000273342 SMIM35A0A1B0GVV1 85 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 LOC285095A0A1B0GVY8 99 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 TPD52L2O43399 206 aaKnown RBP12.65□□□□□ -0.38
COL8A1-202ENST00000273342 RGS10O43665 173 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 VPS26AO75436 327 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 CYP7B1O75881 506 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 VIPP01282 170 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 PGRP06401 933 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 EIF2DP41214 584 aaKnown RBP12.65□□□□□ -0.38
COL8A1-202ENST00000273342 DAPP51397 102 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 TBX4P57082 545 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 SLC35A2P78381 396 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 TOP3AQ13472 1001 aaPredicted RBP12.65□□□□□ -0.38
COL8A1-202ENST00000273342 MFSD10Q14728 455 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 GOLGA7Q7Z5G4 137 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 TMEM86AQ8N2M4 240 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 LPCAT1Q8NF37 534 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 MDGA1Q8NFP4 955 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 PJA1Q8NG27 643 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 YIPF6Q96EC8 236 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 POLR1EQ9GZS1 481 aaKnown RBP12.65□□□□□ -0.38
COL8A1-202ENST00000273342 ACOT13Q9NPJ3 140 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 PDP1Q9P0J1 537 aaPredicted RBP12.65□□□□□ -0.38
COL8A1-202ENST00000273342 KIF17Q9P2E2 1029 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 KLHL3Q9UH77 587 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 TPRKBQ9Y3C4 175 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 ANGPTL3Q9Y5C1 460 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 M0R129 80 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 SCAMP3O14828 347 aaKnown RBP12.65□□□□□ -0.38
COL8A1-202ENST00000273342 UPK1BO75841 260 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 CCNKO75909 580 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 FKBP9O95302 570 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 ARPP19P56211 112 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 SLC39A12Q504Y0 691 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 OVOS1Q6IE37 1185 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 GPR153Q6NV75 609 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 FKBP9P1Q75LS8 142 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 TTC29Q8NA56 475 aaPredicted RBP12.65□□□□□ -0.38
COL8A1-202ENST00000273342 KLHDC9Q8NEP7 349 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 OR7D4Q8NG98 312 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 CDC26Q8NHZ8 85 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 SLC16A10Q8TF71 515 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 TSSK3Q96PN8 268 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 PPP1R2P1Q96PQ5 205 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 NUSAP1Q9BXS6 441 aaKnown RBP12.65□□□□□ -0.38
COL8A1-202ENST00000273342 NEK6Q9HC98 313 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 FBXO8Q9NRD0 319 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 TRMT13Q9NUP7 481 aaKnown RBP12.65□□□□□ -0.38
COL8A1-202ENST00000273342 FAM105AQ9NUU6 356 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 QPCTLQ9NXS2 382 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 EIF3LQ9Y262 564 aaKnown RBP12.65□□□□□ -0.38
COL8A1-202ENST00000273342 TMEM98Q9Y2Y6 226 aa12.65□□□□□ -0.38
COL8A1-202ENST00000273342 PDCD11Q14690 1871 aaKnown RBP12.65□□□□□ -0.39
COL8A1-202ENST00000273342 ANKRD28O15084 1053 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 AIREO43918 545 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 TSPAN12O95859 305 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 HOXC13P31276 330 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 MC4RP32245 332 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 KRT20P35900 424 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 FCGRTP55899 365 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 AFMIDQ63HM1 303 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 METTL23Q86XA0 190 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 SVOPLQ8N434 492 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 KATNBL1Q9H079 304 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 KAT8Q9H7Z6 458 aaKnown RBP12.64□□□□□ -0.39
COL8A1-202ENST00000273342 NECTIN3Q9NQS3 549 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 AGO1Q9UL18 857 aaKnown RBP12.64□□□□□ -0.39
COL8A1-202ENST00000273342 ST3GAL5Q9UNP4 418 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 OR7A17O14581 309 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 AP3D1O14617 1153 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 SERPINF2P08697 491 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 CCDC159P0C7I6 412 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 HOXD8P13378 290 aaPredicted RBP12.64□□□□□ -0.39
COL8A1-202ENST00000273342 PKMP14618 531 aaKnown RBP12.64□□□□□ -0.39
COL8A1-202ENST00000273342 GADD45AP24522 165 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 SUOXP51687 545 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 RACK1P63244 317 aaKnown RBP12.64□□□□□ -0.39
COL8A1-202ENST00000273342 CREMQ03060 361 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 SLC14A1Q13336 389 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 GTF2H2Q13888 395 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 FAM214AQ32MH5 1076 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 SPATS1Q496A3 300 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 RGMBQ6NW40 437 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 GTF2H2CQ6P1K8 395 aa12.64□□□□□ -0.39
COL8A1-202ENST00000273342 SUSD1Q6UWL2 747 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms