RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 AVPR1BP47901 424 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 MTX3Q5HYI7 312 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 ZNF248Q8NDW4 579 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 SMPDL3AQ92484 453 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 CENPIQ92674 756 aaPredicted RBP13.44□□□□□ -0.26
NPC1-201ENST00000269228 WDR6Q9NNW5 1121 aaKnown RBP13.44□□□□□ -0.26
NPC1-201ENST00000269228 HCFC1R1Q9NWW0 138 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 TCRBV21S2A2A0A5A6 115 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 ERN1O75460 977 aaKnown RBP13.44□□□□□ -0.26
NPC1-201ENST00000269228 STATHP02808 62 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 TFPIP10646 304 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 LAMP2P13473 410 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 CYP4B1P13584 511 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 GRIA2P42262 883 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 SMYD5Q6GMV2 418 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 TBC1D21Q8IYX1 336 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 FAM13CQ8NE31 585 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 ZMIZ2Q8NF64 920 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 ANKRD49Q8WVL7 239 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 DTNBP1Q96EV8 351 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 NSUN3Q9H649 340 aaKnown RBP13.44□□□□□ -0.26
NPC1-201ENST00000269228 CLN6Q9NWW5 311 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 RAPGEFL1Q9UHV5 662 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 TOGARAM1Q9Y4F4 1720 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 MAGEB17A8MXT2 336 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 ARHGEF9O43307 516 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 CBSLP0DN79 551 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 CD70P32970 193 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 CBSP35520 551 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 ARRB1P49407 418 aaPredicted RBP13.44□□□□□ -0.26
NPC1-201ENST00000269228 PRR5P85299 388 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 SRSF11Q05519 484 aaKnown RBP13.44□□□□□ -0.26
NPC1-201ENST00000269228 ANGPT1Q15389 498 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 PM20D1Q6GTS8 502 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 OR10A6Q8NH74 314 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 LMX1AQ8TE12 382 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 SLC13A3Q8WWT9 602 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 POP5Q969H6 163 aaKnown RBP13.44□□□□□ -0.26
NPC1-201ENST00000269228 TEFMQ96QE5 360 aaKnown RBP13.44□□□□□ -0.26
NPC1-201ENST00000269228 KLHL25Q9H0H3 589 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 ADAM7Q9H2U9 754 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 ALG2Q9H553 416 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 MRM3Q9HC36 420 aaKnown RBP13.44□□□□□ -0.26
NPC1-201ENST00000269228 MAGEE1Q9HCI5 957 aa13.44□□□□□ -0.26
NPC1-201ENST00000269228 FAM25AB3EWG3 89 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 FAM25CB3EWG5 89 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 FAM25GB3EWG6 89 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 MT-ND1P03886 318 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 ZNF37AP17032 561 aaPredicted RBP13.43□□□□□ -0.26
NPC1-201ENST00000269228 JAK1P23458 1154 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 RYKP34925 604 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 BNIP1Q12981 228 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 MRPL28Q13084 256 aaKnown RBP13.43□□□□□ -0.26
NPC1-201ENST00000269228 SLC9A5Q14940 896 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 LARS2Q15031 903 aaKnown RBP13.43□□□□□ -0.26
NPC1-201ENST00000269228 INAQ16352 499 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 PTCHD3Q3KNS1 767 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 FGD2Q7Z6J4 655 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 THOC6Q86W42 341 aaKnown RBP13.43□□□□□ -0.26
NPC1-201ENST00000269228 TERB1Q8NA31 727 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 C2CD4AQ8NCU7 369 aaPredicted RBP13.43□□□□□ -0.26
NPC1-201ENST00000269228 KLHDC7BQ96G42 594 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 DPYSL5Q9BPU6 564 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 RETREG1Q9H6L5 497 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 VPS29Q9UBQ0 182 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 TRPS1Q9UHF7 1281 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 GON4LQ3T8J9 2241 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 TMEM233B4DJY2 109 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 LIN7AO14910 233 aaPredicted RBP13.43□□□□□ -0.26
NPC1-201ENST00000269228 OR1I1O60431 355 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 KRT33AO76009 404 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 GSRP00390 522 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 MAGEA10P43363 369 aaPredicted RBP13.43□□□□□ -0.26
NPC1-201ENST00000269228 NR1D2Q14995 579 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 AAGABQ6PD74 315 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 MTERF3Q96E29 417 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 DUSP26Q9BV47 211 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 LCHNA4D1U4 455 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 PDPK1O15530 556 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 LATS1O95835 1130 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 TOP3BO95985 862 aaKnown RBP13.43□□□□□ -0.26
NPC1-201ENST00000269228 ERVK-8P63133 956 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 ELAVL3Q14576 367 aaKnown RBP13.43□□□□□ -0.26
NPC1-201ENST00000269228 FRG2Q64ET8 278 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 LRRC70Q7Z2Q7 622 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 TEX47Q8TBZ9 253 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 NECTIN4Q96NY8 510 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 FRG2BQ96QU4 278 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 DCUN1D5Q9BTE7 237 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 LINC00597Q9H2U6 94 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 ANKHQ9HCJ1 492 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 PGDP52209 483 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 RGS8P57771 180 aaPredicted RBP13.43□□□□□ -0.26
NPC1-201ENST00000269228 SEMA3AQ14563 771 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 AGTRAPQ6RW13 159 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 CADM2Q8N3J6 435 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 OR2T34Q8NGX1 318 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 OR2T3Q8NH03 318 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 DEPDC7Q96QD5 511 aa13.43□□□□□ -0.26
NPC1-201ENST00000269228 SLC2A11Q9BYW1 496 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms