RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 SERGEFQ9UGK8 458 aa15□□□□□ -0.01
COPS3-201ENST00000268717 TSR3Q9UJK0 312 aaKnown RBP15□□□□□ -0.01
COPS3-201ENST00000268717 FIS1Q9Y3D6 152 aa15□□□□□ -0.01
COPS3-201ENST00000268717 DNMT3AQ9Y6K1 912 aaPredicted RBP15□□□□□ -0.01
COPS3-201ENST00000268717 FRYLO94915 3013 aa15□□□□□ -0.01
COPS3-201ENST00000268717 IGLON5A6NGN9 336 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 B2RBV5 119 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 OR7A17O14581 309 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 PIP5K1BO14986 540 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 CHUKO15111 745 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 GSC2O15499 205 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 MGRN1O60291 552 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 GFRA3O60609 400 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 RNASEH2AO75792 299 aaKnown RBP14.99□□□□□ -0.01
COPS3-201ENST00000268717 PCDH8O95206 1070 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 CATP04040 527 aaKnown RBP14.99□□□□□ -0.01
COPS3-201ENST00000268717 COX4I1P13073 169 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 EZRP15311 586 aaKnown RBP14.99□□□□□ -0.01
COPS3-201ENST00000268717 PIK3R1P27986 724 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 HOXA6P31267 233 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 SLC6A12P48065 614 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 HSPA7P48741 367 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 FOXA1P55317 472 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 TRAF3Q13114 568 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 RIPK1Q13546 671 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 ZNF648Q5T619 568 aaPredicted RBP14.99□□□□□ -0.01
COPS3-201ENST00000268717 OGFOD2Q6N063 350 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 ASCL5Q7RTU5 278 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 HM13Q8TCT9 377 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 ATL1Q8WXF7 558 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 PPP1R36Q96LQ0 422 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 MAGEB10Q96LZ2 347 aaPredicted RBP14.99□□□□□ -0.01
COPS3-201ENST00000268717 FOPNLQ96NB1 174 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 RTKNQ9BST9 563 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 C1QTNF7Q9BXJ2 289 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 C1QTNF2Q9BXJ5 285 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 TEX101Q9BY14 249 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 CADM1Q9BY67 442 aaKnown RBP14.99□□□□□ -0.01
COPS3-201ENST00000268717 DPEP2Q9H4A9 486 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 IPPKQ9H8X2 491 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 FBXL12Q9NXK8 326 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 ATXN10Q9UBB4 475 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 TRPS1Q9UHF7 1281 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 COPG1Q9Y678 874 aaKnown RBP14.99□□□□□ -0.01
COPS3-201ENST00000268717 GVINP1Q7Z2Y8 2422 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 TMEM202A6NGA9 273 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 EBLN1P0CF75 366 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 PRR35P0CG20 571 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 EPB42P16452 691 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 TRIM23P36406 574 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 ACADVLP49748 655 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 CCNG1P51959 295 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 ERVPABLB-1P60509 514 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 CDK3Q00526 305 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 DMWDQ09019 674 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 RPA4Q13156 261 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 MAPRE2Q15555 327 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 WSCD2Q2TBF2 565 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 TMEM259Q4ZIN3 620 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 FBXO48Q5FWF7 155 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 EOGTQ5NDL2 527 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 CYB5D1Q6P9G0 228 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 RINLQ6ZS11 566 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 SYT13Q7L8C5 426 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 TRAPPC5Q8IUR0 188 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 RBM15BQ8NDT2 890 aaKnown RBP14.99□□□□□ -0.01
COPS3-201ENST00000268717 OR52B6Q8NGF0 335 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 OR2L2Q8NH16 312 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 SKA2Q8WVK7 121 aaPredicted RBP14.99□□□□□ -0.01
COPS3-201ENST00000268717 CATSPER2Q96P56 530 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 LENG8Q96PV6 779 aaPredicted RBP14.99□□□□□ -0.01
COPS3-201ENST00000268717 TUBB1Q9H4B7 451 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 SLC32A1Q9H598 525 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 AKTIPQ9H8T0 292 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 KLC4Q9NSK0 619 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 ANGPTL3Q9Y5C1 460 aa14.99□□□□□ -0.01
COPS3-201ENST00000268717 ANKRD12Q6UB98 2062 aa14.98□□□□□ -0.01
COPS3-201ENST00000268717 A0A1B0GTL3 188 aa14.98□□□□□ -0.01
COPS3-201ENST00000268717 CCNT2O60583 730 aaKnown RBP14.98□□□□□ -0.01
COPS3-201ENST00000268717 WDR47O94967 919 aa14.98□□□□□ -0.01
COPS3-201ENST00000268717 LMNAP02545 664 aaKnown RBP14.98□□□□□ -0.01
COPS3-201ENST00000268717 MAP4P27816 1152 aaKnown RBP14.98□□□□□ -0.01
COPS3-201ENST00000268717 PRDX3P30048 256 aaKnown RBP14.98□□□□□ -0.01
COPS3-201ENST00000268717 CPOXP36551 454 aa14.98□□□□□ -0.01
COPS3-201ENST00000268717 PTK2BQ14289 1009 aa14.98□□□□□ -0.01
COPS3-201ENST00000268717 ZRSR2Q15696 482 aaKnown RBP14.98□□□□□ -0.01
COPS3-201ENST00000268717 GGTA1PQ4G0N0 100 aa14.98□□□□□ -0.01
COPS3-201ENST00000268717 TMEM198Q66K66 360 aa14.98□□□□□ -0.01
COPS3-201ENST00000268717 LETMD1Q6P1Q0 360 aa14.98□□□□□ -0.01
COPS3-201ENST00000268717 LONP2Q86WA8 852 aa14.98□□□□□ -0.01
COPS3-201ENST00000268717 HEATR4Q86WZ0 1026 aa14.98□□□□□ -0.01
COPS3-201ENST00000268717 OXR1Q8N573 874 aa14.98□□□□□ -0.01
COPS3-201ENST00000268717 TP53I13Q8NBR0 393 aaPredicted RBP14.98□□□□□ -0.01
COPS3-201ENST00000268717 PLA2G15Q8NCC3 412 aa14.98□□□□□ -0.01
COPS3-201ENST00000268717 ESAMQ96AP7 390 aa14.98□□□□□ -0.01
COPS3-201ENST00000268717 C3orf30Q96M34 536 aa14.98□□□□□ -0.01
COPS3-201ENST00000268717 CCDC138Q96M89 665 aa14.98□□□□□ -0.01
COPS3-201ENST00000268717 KCNA7Q96RP8 456 aa14.98□□□□□ -0.01
COPS3-201ENST00000268717 SLC29A3Q9BZD2 475 aa14.98□□□□□ -0.01
COPS3-201ENST00000268717 RIC8BQ9NVN3 520 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms