RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 UBDO15205 165 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 KMOO15229 486 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 KATNA1O75449 491 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 IGLV3-19P01714 112 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 CAPN1P07384 714 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 EBLN1P0CF75 366 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 PIK3R1P27986 724 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 ATP4BP51164 291 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 HERC3Q15034 1050 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 FAM124AQ86V42 546 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 OR2T34Q8NGX1 318 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 METTL6Q8TCB7 284 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 ATL1Q8WXF7 558 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 UTP4Q969X6 686 aaKnown RBP15.95■□□□□ 0.14
TPM1-201ENST00000267996 ATP6V1E2Q96A05 226 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 APOOQ9BUR5 198 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 RMI1Q9H9A7 625 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 EBF1Q9UH73 591 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 TRPS1Q9UHF7 1281 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 POLG2Q9UHN1 485 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 BTRCQ9Y297 605 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 SLC17A4Q9Y2C5 497 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 PRKAB1Q9Y478 270 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 ATP6AP2A0A1C7CYW4 349 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 KRT87PA6NCN2 255 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 B2RBV5 119 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 ATP6AP2O75787 350 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 FUCA1P04066 466 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 CEACAM5P06731 702 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 KRT16P08779 473 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 LINC00032P0C843 101 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 COX4I1P13073 169 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 MAT2AP31153 395 aaKnown RBP15.95■□□□□ 0.14
TPM1-201ENST00000267996 ACSL1P33121 698 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 MNAT1P51948 309 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 DGKEP52429 567 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 PFN3P60673 137 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 DMPKQ09013 629 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 CCSMST1Q4G0I0 132 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 PRPF38BQ5VTL8 546 aaKnown RBP15.95■□□□□ 0.14
TPM1-201ENST00000267996 METRNLQ641Q3 311 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 OGFOD2Q6N063 350 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 UNC5DQ6UXZ4 953 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 SYT13Q7L8C5 426 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 DDIASQ8IXT1 998 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 DCBLD1Q8N8Z6 715 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 SCARF2Q96GP6 870 aaPredicted RBP15.95■□□□□ 0.14
TPM1-201ENST00000267996 PKP4Q99569 1192 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 ZDHHC5Q9C0B5 715 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 C1orf21Q9H246 121 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 SGK2Q9HBY8 427 aa15.95■□□□□ 0.14
TPM1-201ENST00000267996 POLMQ9NP87 494 aaPredicted RBP15.95■□□□□ 0.14
TPM1-201ENST00000267996 STOX2Q9P2F5 926 aaPredicted RBP15.95■□□□□ 0.14
TPM1-201ENST00000267996 G3BP2Q9UN86 482 aaKnown RBP15.95■□□□□ 0.14
TPM1-201ENST00000267996 SLC31A1O15431 190 aa15.94■□□□□ 0.14
TPM1-201ENST00000267996 WDR47O94967 919 aa15.94■□□□□ 0.14
TPM1-201ENST00000267996 HGFP14210 728 aa15.94■□□□□ 0.14
TPM1-201ENST00000267996 LBPP18428 481 aa15.94■□□□□ 0.14
TPM1-201ENST00000267996 BDKRB1P46663 353 aa15.94■□□□□ 0.14
TPM1-201ENST00000267996 CPA2P48052 419 aa15.94■□□□□ 0.14
TPM1-201ENST00000267996 IRX1P78414 480 aaPredicted RBP15.94■□□□□ 0.14
TPM1-201ENST00000267996 PTK2BQ14289 1009 aa15.94■□□□□ 0.14
TPM1-201ENST00000267996 SQLEQ14534 574 aa15.94■□□□□ 0.14
TPM1-201ENST00000267996 PLA2G4EQ3MJ16 856 aa15.94■□□□□ 0.14
TPM1-201ENST00000267996 GGTA1PQ4G0N0 100 aa15.94■□□□□ 0.14
TPM1-201ENST00000267996 HABP4Q5JVS0 413 aaKnown RBP15.94■□□□□ 0.14
TPM1-201ENST00000267996 TCHHL1Q5QJ38 904 aaPredicted RBP15.94■□□□□ 0.14
TPM1-201ENST00000267996 PDZD3Q86UT5 571 aa15.94■□□□□ 0.14
TPM1-201ENST00000267996 POU5F2Q8N7G0 328 aa15.94■□□□□ 0.14
TPM1-201ENST00000267996 OR56A3Q8NH54 315 aa15.94■□□□□ 0.14
TPM1-201ENST00000267996 MARK4Q96L34 752 aa15.94■□□□□ 0.14
TPM1-201ENST00000267996 RAB3IPQ96QF0 476 aaPredicted RBP15.94■□□□□ 0.14
TPM1-201ENST00000267996 CADM1Q9BY67 442 aaKnown RBP15.94■□□□□ 0.14
TPM1-201ENST00000267996 BTBD1Q9H0C5 482 aa15.94■□□□□ 0.14
TPM1-201ENST00000267996 SLC40A1Q9NP59 571 aa15.94■□□□□ 0.14
TPM1-201ENST00000267996 DNAJC11Q9NVH1 559 aa15.94■□□□□ 0.14
TPM1-201ENST00000267996 CA14Q9ULX7 337 aa15.94■□□□□ 0.14
TPM1-201ENST00000267996 PRR19A6NJB7 356 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 LRRC72A6NJI9 287 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 H0YHG0 523 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 GYG2O15488 501 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 GSC2O15499 205 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 LATO43561 262 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 RASSF9O75901 435 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 ALDOCP09972 364 aaKnown RBP15.93■□□□□ 0.14
TPM1-201ENST00000267996 THRAP10827 490 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 IMPA1P29218 277 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 CPOXP36551 454 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 PCDH1Q08174 1060 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 FZD5Q13467 585 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 LRRC32Q14392 662 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 GRB7Q14451 532 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 AGTRAPQ6RW13 159 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 DEFB123Q8N688 67 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 RBM15BQ8NDT2 890 aaKnown RBP15.93■□□□□ 0.14
TPM1-201ENST00000267996 FBXO27Q8NI29 283 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 RP9Q8TA86 221 aaKnown RBP15.93■□□□□ 0.14
TPM1-201ENST00000267996 HMGCLL1Q8TB92 370 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 HMGB4Q8WW32 186 aa15.93■□□□□ 0.14
TPM1-201ENST00000267996 TUBGCP3Q96CW5 907 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms