RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 VRK3Q8IV63 474 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 KRT222Q8N1A0 295 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 MPP5Q8N3R9 675 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 SLC38A9Q8NBW4 561 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 OR1L3Q8NH93 324 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 LKAAEAR1Q8TD35 194 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 MFSD3Q96ES6 412 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 OR2A14Q96R47 310 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 GPR87Q9BY21 358 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 FAM117AQ9C073 453 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 TWSG1Q9GZX9 223 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 KLHL25Q9H0H3 589 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 FANCEQ9HB96 536 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 OR6C2Q9NZP2 312 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 SERTAD3Q9UJW9 196 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 SOX13Q9UN79 622 aa15.56■□□□□ 0.08
USE1-201ENST00000263897 J3QKU1 62 aa15.55■□□□□ 0.08
USE1-201ENST00000263897 KDM1AO60341 852 aa15.55■□□□□ 0.08
USE1-201ENST00000263897 AVILO75366 819 aa15.55■□□□□ 0.08
USE1-201ENST00000263897 NDUFS3O75489 264 aa15.55■□□□□ 0.08
USE1-201ENST00000263897 KLK3P07288 261 aaPredicted RBP15.55■□□□□ 0.08
USE1-201ENST00000263897 CHRM5P08912 532 aaPredicted RBP15.55■□□□□ 0.08
USE1-201ENST00000263897 FURINP09958 794 aa15.55■□□□□ 0.08
USE1-201ENST00000263897 ARNTP27540 789 aa15.55■□□□□ 0.08
USE1-201ENST00000263897 COILP38432 576 aaPredicted RBP15.55■□□□□ 0.08
USE1-201ENST00000263897 VPS41P49754 854 aa15.55■□□□□ 0.08
USE1-201ENST00000263897 TERF1P54274 439 aa15.55■□□□□ 0.08
USE1-201ENST00000263897 ABRQ12979 859 aa15.55■□□□□ 0.08
USE1-201ENST00000263897 GPS2Q13227 327 aa15.55■□□□□ 0.08
USE1-201ENST00000263897 KCNAB2Q13303 367 aa15.55■□□□□ 0.08
USE1-201ENST00000263897 CYP1B1Q16678 543 aa15.55■□□□□ 0.08
USE1-201ENST00000263897 PRAMEF17Q5VTA0 474 aa15.55■□□□□ 0.08
USE1-201ENST00000263897 ARMC3Q5W041 872 aa15.55■□□□□ 0.08
USE1-201ENST00000263897 PTRHD1Q6GMV3 140 aaKnown RBP15.55■□□□□ 0.08
USE1-201ENST00000263897 ZNF517Q6ZMY9 492 aaPredicted RBP15.55■□□□□ 0.08
USE1-201ENST00000263897 SDCCAG8Q86SQ7 713 aaPredicted RBP15.55■□□□□ 0.08
USE1-201ENST00000263897 CAND1Q86VP6 1230 aaKnown RBP15.55■□□□□ 0.08
USE1-201ENST00000263897 HOOK3Q86VS8 718 aa15.55■□□□□ 0.08
USE1-201ENST00000263897 LRRC6Q86X45 466 aa15.55■□□□□ 0.08
USE1-201ENST00000263897 FLVCR1-AS1Q8TAF5 88 aa15.55■□□□□ 0.08
USE1-201ENST00000263897 CPT1BQ92523 772 aa15.55■□□□□ 0.08
USE1-201ENST00000263897 LRFN5Q96NI6 719 aa15.55■□□□□ 0.08
USE1-201ENST00000263897 NAP1L3Q99457 506 aaPredicted RBP15.55■□□□□ 0.08
USE1-201ENST00000263897 SPHK1Q9NYA1 384 aa15.55■□□□□ 0.08
USE1-201ENST00000263897 SNRNP200O75643 2136 aaKnown RBP15.55■□□□□ 0.08
USE1-201ENST00000263897 TMEM150CB9EJG8 249 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 KPNA5O15131 536 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 ZSCAN12O43309 604 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 UGT2B7P16662 529 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 RPS3P23396 243 aaKnown RBP eCLIP15.54■□□□□ 0.08
USE1-201ENST00000263897 PTPN4P29074 926 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 KYNUQ16719 465 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 ZNF789Q5FWF6 425 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 PLEKHS1Q5SXH7 462 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 ANKRD22Q5VYY1 191 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 MRNIPQ6NTE8 343 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 CCDC137Q6PK04 289 aaKnown RBP15.54■□□□□ 0.08
USE1-201ENST00000263897 CDHR3Q6ZTQ4 885 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 SLC35F6Q8N357 371 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 CFAP61Q8NHU2 1237 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 MR1Q95460 341 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 TCTN2Q96GX1 697 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 PANX3Q96QZ0 392 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 TCF12Q99081 682 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 CHRNA10Q9GZZ6 450 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 ACTL8Q9H568 366 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 FAM60AQ9NP50 221 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 GNPTGQ9UJJ9 305 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 PLAGL1Q9UM63 463 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 POLHQ9Y253 713 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 FARSAQ9Y285 508 aaKnown RBP15.54■□□□□ 0.08
USE1-201ENST00000263897 NEU2Q9Y3R4 380 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 HEMK1Q9Y5R4 338 aaPredicted RBP15.54■□□□□ 0.08
USE1-201ENST00000263897 KCNMB2Q9Y691 235 aa15.54■□□□□ 0.08
USE1-201ENST00000263897 MAGEB16A2A368 324 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 ISM1B1AKI9 464 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 GOLGA8KD6RF30 607 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 GOLGA8TH3BQL2 631 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 MEN1O00255 615 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 PGRMC1O00264 195 aaKnown RBP15.53■□□□□ 0.08
USE1-201ENST00000263897 SLC28A2O43868 658 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 RPN2P04844 631 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 MLNP12872 115 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 RPS15P62841 145 aaKnown RBP15.53■□□□□ 0.08
USE1-201ENST00000263897 NFKB2Q00653 900 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 KIR2DS3Q14952 304 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 TMED2Q15363 201 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 ZIC1Q15915 447 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 KIAA0930Q6ICG6 404 aaPredicted RBP15.53■□□□□ 0.08
USE1-201ENST00000263897 UNC5DQ6UXZ4 953 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 TRIM73Q86UV7 250 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 DSELQ8IZU8 1212 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 MCUQ8NE86 351 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 ACTRT1Q8TDG2 376 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 COG1Q8WTW3 980 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 CLIP3Q96DZ5 547 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 BIRC8Q96P09 236 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 OSBPL9Q96SU4 736 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 RUFY1Q96T51 708 aa15.53■□□□□ 0.08
USE1-201ENST00000263897 MENTQ9BUN1 341 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms