RNA–Protein interactions for RNA: ENST00000262539.7

PTPN3-201, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 5 BASIC

Gene PTPN3, Length 6,832 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-201ENST00000262539 ARL8BQ9NVJ2 186 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 LHX3Q9UBR4 397 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 CNOT11Q9UKZ1 510 aaKnown RBP8.07□□□□□ -1.12
PTPN3-201ENST00000262539 TSPAN11A1L157 253 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 LRRC72A6NJI9 287 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 RGS5O15539 181 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 SNAP91O60641 907 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 KLKB1P03952 638 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 TYRP14679 529 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 GALNT3Q14435 633 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 ZNF678Q5SXM1 525 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 ZNF776Q68DI1 518 aaPredicted RBP8.07□□□□□ -1.12
PTPN3-201ENST00000262539 CNSTQ6PJW8 725 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 PAQR3Q6TCH7 311 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 ISCA2Q86U28 154 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 GPR180Q86V85 440 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 PROSER1Q86XN7 944 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 ELMO1Q92556 727 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 SLC7A6OSQ96CW6 309 aaPredicted RBP8.07□□□□□ -1.12
PTPN3-201ENST00000262539 ASB9Q96DX5 294 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 ATOH8Q96SQ7 321 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 GPR34Q9UPC5 381 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 ARNTLO00327 626 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 FFAR2O15552 330 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 ALPPL2P10696 532 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 RPIAP49247 311 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 PRKAG1P54619 331 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 MTTPP55157 894 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 ABATP80404 500 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 NADSYN1Q6IA69 706 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 RDH12Q96NR8 316 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 CADM1Q9BY67 442 aaKnown RBP8.07□□□□□ -1.12
PTPN3-201ENST00000262539 PCDHB11Q9Y5F2 797 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 SNX10Q9Y5X0 201 aa8.07□□□□□ -1.12
PTPN3-201ENST00000262539 H3BM21 787 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 H3BNC9 293 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 SDHDO14521 159 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 FASP25445 335 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 PTX3P26022 381 aaPredicted RBP8.06□□□□□ -1.12
PTPN3-201ENST00000262539 BNC1Q01954 994 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 SLC44A4Q53GD3 710 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 ARMC4Q5T2S8 1044 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 KLHL35Q6PF15 583 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 LYSMD3Q7Z3D4 306 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 OR13C4Q8NGS5 318 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 SELENOMQ8WWX9 145 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 SLC22A18Q96BI1 424 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 ECHDC3Q96DC8 303 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 SLC12A9Q9BXP2 914 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 PNPOQ9NVS9 261 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 ACSL5Q9ULC5 683 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 TMEM265A0A087WTH1 108 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 NEDD8-MDP1E9PL57 170 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 ALBP02768 609 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 IDSP22304 550 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 ALAS2P22557 587 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 ITGB7P26010 798 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 SLC5A9Q2M3M2 681 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 PPM1JQ5JR12 505 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 FGD3Q5JSP0 725 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 ST13P5Q8NFI4 369 aaPredicted RBP8.06□□□□□ -1.12
PTPN3-201ENST00000262539 TWIST2Q8WVJ9 160 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 SMPDL3AQ92484 453 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 PHF21BQ96EK2 531 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 SPATA9Q9BWV2 254 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 FAM192AQ9GZU8 254 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 SDR39U1Q9NRG7 319 aaPredicted RBP8.06□□□□□ -1.12
PTPN3-201ENST00000262539 INTS7Q9NVH2 962 aaKnown RBP8.06□□□□□ -1.12
PTPN3-201ENST00000262539 PSME2Q9UL46 239 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 MCIDASD6RGH6 385 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 INPP4BO15327 924 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 KLK8O60259 260 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 HNRNPCP07910 306 aaKnown RBP eCLIP8.06□□□□□ -1.12
PTPN3-201ENST00000262539 PRPS1L1P21108 318 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 ELOAQ14241 798 aaKnown RBP8.06□□□□□ -1.12
PTPN3-201ENST00000262539 TSNQ15631 228 aaKnown RBP8.06□□□□□ -1.12
PTPN3-201ENST00000262539 NIPAL1Q6NVV3 410 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 RPTNQ6XPR3 784 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 FBXW8Q8N3Y1 598 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 KIF2BQ8N4N8 673 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 OR52K2Q8NGK3 314 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 SUN3Q8TAQ9 357 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 GTPBP2Q9BX10 602 aaKnown RBP8.06□□□□□ -1.12
PTPN3-201ENST00000262539 IPPKQ9H8X2 491 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 MRPL39Q9NYK5 338 aaKnown RBP8.06□□□□□ -1.12
PTPN3-201ENST00000262539 MAT2BQ9NZL9 334 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 hCG_2014768A0A024R1R8 64 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 LINC00854A0A1B0GVQ3 168 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 SOX6P35712 828 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 WASP42768 502 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 PSMD8P48556 350 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 DHCR24Q15392 516 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 TMEM132CQ8N3T6 1108 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 TERB1Q8NA31 727 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 GPR152Q8TDT2 470 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 FBXL8Q96CD0 374 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 VPS35Q96QK1 796 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 TSC22D3Q99576 134 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 FAIM2Q9BWQ8 316 aa8.06□□□□□ -1.12
PTPN3-201ENST00000262539 YTHDF1Q9BYJ9 559 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms