RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 ADAM23O75077 832 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 CREG1O75629 220 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 AP2A2O94973 939 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 FGF1P05230 155 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 C8BP07358 591 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 CDH1P12830 882 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 WARSP23381 471 aaKnown RBP9.91□□□□□ -0.82
PALB2-201ENST00000261584 ARCN1P48444 511 aaKnown RBP9.91□□□□□ -0.82
PALB2-201ENST00000261584 GATMP50440 423 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 HLCSP50747 726 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 SF3B4Q15427 424 aaKnown RBP eCLIP9.91□□□□□ -0.82
PALB2-201ENST00000261584 FAM187BQ17R55 369 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 TAPT1Q6NXT6 567 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 AFTPHQ6ULP2 937 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 ANKS3Q6ZW76 656 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 TMEM86AQ8N2M4 240 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 NETO1Q8TDF5 533 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 NTAN1Q96AB6 310 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 HCSTQ9UBK5 93 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 DNAJB9Q9UBS3 223 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 ATP6V1HQ9UI12 483 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 SLC13A4Q9UKG4 626 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 USP3Q9Y6I4 520 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 ZNFX1Q9P2E3 1918 aaKnown RBP9.91□□□□□ -0.82
PALB2-201ENST00000261584 SOCS7O14512 581 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 FHP07954 510 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 AXLP30530 894 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 CRYBB1P53674 252 aaPredicted RBP9.91□□□□□ -0.82
PALB2-201ENST00000261584 PHC1P78364 1004 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 ENPEPQ07075 957 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 TIGD6Q17RP2 521 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 USP39Q53GS9 565 aaKnown RBP9.91□□□□□ -0.82
PALB2-201ENST00000261584 ARMCX4Q5H9R4 360 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 MS4A13Q5J8X5 152 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 MARCH8Q5T0T0 291 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 DEF8Q6ZN54 512 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 GOLGA7Q7Z5G4 137 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 ARHGAP12Q8IWW6 846 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 NLGN4XQ8N0W4 816 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 OR4K1Q8NGD4 311 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 BRSK1Q8TDC3 778 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 MYLIPQ8WY64 445 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 NCSTNQ92542 709 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 AARSD1Q9BTE6 412 aaKnown RBP9.91□□□□□ -0.82
PALB2-201ENST00000261584 WDR12Q9GZL7 423 aaKnown RBP9.91□□□□□ -0.82
PALB2-201ENST00000261584 CRISPLD1Q9H336 500 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 ZDHHC6Q9H6R6 413 aa9.91□□□□□ -0.82
PALB2-201ENST00000261584 SCN1AP35498 2009 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.9□□□□□ -0.82
PALB2-201ENST00000261584 FAM234BA2RU67 622 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 HNRNPCL2B2RXH8 293 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 FAM25AB3EWG3 89 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 FAM25CB3EWG5 89 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 FAM25GB3EWG6 89 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 SLC1A7O00341 560 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 FCER2P06734 321 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 GJA1P17302 382 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 DDX5P17844 614 aaKnown RBP9.9□□□□□ -0.82
PALB2-201ENST00000261584 SSTR4P31391 388 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 PTGER1P34995 402 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 FEN1P39748 380 aaKnown RBP9.9□□□□□ -0.82
PALB2-201ENST00000261584 RGRP47804 291 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 TTPAP49638 278 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 EMP3P54852 163 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 ZNF280AP59817 542 aaPredicted RBP9.9□□□□□ -0.82
PALB2-201ENST00000261584 SNRPD2P62316 118 aaKnown RBP9.9□□□□□ -0.82
PALB2-201ENST00000261584 MRPS6P82932 125 aaKnown RBP9.9□□□□□ -0.82
PALB2-201ENST00000261584 CTBSQ01459 385 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 SLC36A3Q495N2 470 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 ZFP69Q49AA0 526 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 PYDC2Q56P42 97 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 PRR23CQ6ZRP0 262 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 DDX53Q86TM3 631 aaKnown RBP9.9□□□□□ -0.82
PALB2-201ENST00000261584 UXS1Q8NBZ7 420 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 MTMR14Q8NCE2 650 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 OR2T11Q8NH01 316 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 HMGCLL1Q8TB92 370 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 PPP3R2Q96LZ3 170 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 SLC9A7Q96T83 725 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 HDHD2Q9H0R4 259 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 RPRD1BQ9NQG5 326 aaKnown RBP9.9□□□□□ -0.82
PALB2-201ENST00000261584 KLHL3Q9UH77 587 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 PTCH2Q9Y6C5 1203 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 CEP290O15078 2479 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 KIR3DL1P43629 444 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 RPIAP49247 311 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 RNF144AP50876 292 aaPredicted RBP9.9□□□□□ -0.82
PALB2-201ENST00000261584 IL18R1Q13478 541 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 RFTN1Q14699 578 aaPredicted RBP9.9□□□□□ -0.82
PALB2-201ENST00000261584 KCNJ8Q15842 424 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 INO80DQ53TQ3 878 aaPredicted RBP9.9□□□□□ -0.82
PALB2-201ENST00000261584 SPATA19Q7Z5L4 167 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 MON1AQ86VX9 555 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 SVOPQ8N4V2 548 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 C2orf69Q8N8R5 385 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 VPS37AQ8NEZ2 397 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 PCNPQ8WW12 178 aaKnown RBP9.9□□□□□ -0.82
PALB2-201ENST00000261584 LGALS12Q96DT0 336 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 ASB2Q96Q27 587 aa9.9□□□□□ -0.82
PALB2-201ENST00000261584 KAT8Q9H7Z6 458 aaKnown RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms