RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 BNIP1Q12981 228 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 TEAD4Q15561 434 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 SWI5Q1ZZU3 235 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 SOWAHAQ2M3V2 549 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 FOXR2Q6PJQ5 311 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 KCTD8Q6ZWB6 473 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 PRRT2Q7Z6L0 340 aaPredicted RBP11.89□□□□□ -0.51
COL8A1-201ENST00000261037 GPATCH1Q9BRR8 931 aaKnown RBP11.89□□□□□ -0.51
COL8A1-201ENST00000261037 ZNF358Q9NW07 568 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 CDH7Q9ULB5 785 aa11.89□□□□□ -0.51
COL8A1-201ENST00000261037 DHFRP00374 187 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 CREB1P16220 341 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 LCN1P1Q5VSP4 162 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 LINGO2Q7L985 606 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 IQCKQ8N0W5 287 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 OR4C6Q8NH72 309 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 EBF4Q9BQW3 602 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 RIOK2Q9BVS4 552 aaKnown RBP11.88□□□□□ -0.51
COL8A1-201ENST00000261037 MUC13Q9H3R2 512 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 A0A0X1KG70 313 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 PLK4O00444 970 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 NIPSNAP2O75323 286 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 TGFB1P01137 390 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 CFHP08603 1231 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 SYN1P17600 705 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 NSG1P42857 185 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 SCARB2Q14108 478 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 PUM1Q14671 1186 aaKnown RBP eCLIP11.88□□□□□ -0.51
COL8A1-201ENST00000261037 IFI44LQ53G44 452 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 SLC22A15Q8IZD6 547 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 DENND2DQ9H6A0 471 aaPredicted RBP11.88□□□□□ -0.51
COL8A1-201ENST00000261037 CCSER2Q9H7U1 834 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 RNF121Q9H920 327 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 PEAK1Q9H792 1746 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 TOR1BO14657 336 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 AIREO43918 545 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 PSMA1P25786 263 aaKnown RBP11.88□□□□□ -0.51
COL8A1-201ENST00000261037 CLCN7P51798 805 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 VLDLRP98155 873 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 SP140Q13342 867 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 TCEAL6Q6IPX3 200 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 GPR153Q6NV75 609 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 CLEC20AQ6ZU45 233 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 MMAAQ8IVH4 418 aaKnown RBP11.88□□□□□ -0.51
COL8A1-201ENST00000261037 OR2L3Q8NG85 312 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 OR2AJ1Q8NGZ0 328 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 DGCR14Q96DF8 476 aaKnown RBP11.88□□□□□ -0.51
COL8A1-201ENST00000261037 DUSP26Q9BV47 211 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 COMMD4Q9H0A8 199 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 COQ10BQ9H8M1 238 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 PNPLA8Q9NP80 782 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 CNTN6Q9UQ52 1028 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 LMO7Q8WWI1 1683 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 NRP1O14786 923 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 PCDH7O60245 1069 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 NPHS1O60500 1241 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 KERAO60938 352 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 CCNKO75909 580 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 ASLP04424 464 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 ZBTB48P10074 688 aaPredicted RBP11.88□□□□□ -0.51
COL8A1-201ENST00000261037 ACVR2AP27037 513 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 GRK6P43250 576 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 TAS2R39P59534 338 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 LRRC32Q14392 662 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 CLEC12AQ5QGZ9 265 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 CENPNQ96H22 339 aaPredicted RBP11.88□□□□□ -0.51
COL8A1-201ENST00000261037 CITED4Q96RK1 184 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 PLAGL1Q9UM63 463 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 GRIP1Q9Y3R0 1128 aa11.88□□□□□ -0.51
COL8A1-201ENST00000261037 ANXA2P2A6NMY6 339 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 ADAMTS3O15072 1205 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 HCRTO43612 131 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 ITM2AO43736 263 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 ESR1P03372 595 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 S100A9P06702 114 aaKnown RBP11.87□□□□□ -0.51
COL8A1-201ENST00000261037 ANXA2P07355 339 aaKnown RBP11.87□□□□□ -0.51
COL8A1-201ENST00000261037 GRIA1P42261 906 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 HEPACAMQ14CZ8 416 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 SLC13A3Q8WWT9 602 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 ZNF516Q92618 1163 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 POP5Q969H6 163 aaKnown RBP11.87□□□□□ -0.51
COL8A1-201ENST00000261037 KCNC2Q96PR1 638 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 EBF3Q9H4W6 596 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 CARS2Q9HA77 564 aaKnown RBP11.87□□□□□ -0.51
COL8A1-201ENST00000261037 POLMQ9NP87 494 aaPredicted RBP11.87□□□□□ -0.51
COL8A1-201ENST00000261037 ZNF221Q9UK13 617 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 WASF2Q9Y6W5 498 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 NEMP2A6NFY4 417 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 A8MU76 341 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 H3BSH0 61 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 ADAMDEC1O15204 470 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 ZNF823P16415 610 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 PTP4A2Q12974 167 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 BICRALQ6AI39 1079 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 ZNF598Q86UK7 904 aaKnown RBP11.87□□□□□ -0.51
COL8A1-201ENST00000261037 CAND1Q86VP6 1230 aaKnown RBP11.87□□□□□ -0.51
COL8A1-201ENST00000261037 P2RY8Q86VZ1 359 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 OR6K6Q8NGW6 343 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 COQ8BQ96D53 544 aa11.87□□□□□ -0.51
COL8A1-201ENST00000261037 CADM1Q9BY67 442 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms