RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 CSE1LP55060 971 aaKnown RBP16.34■□□□□ 0.21
SDCBP-201ENST00000260130 INHBCP55103 352 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 CFHR1Q03591 330 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 ZFP36L1Q07352 338 aaKnown RBP16.34■□□□□ 0.21
SDCBP-201ENST00000260130 HSPA14Q0VDF9 509 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 KRT33BQ14525 404 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 ZNF574Q6ZN55 896 aaPredicted RBP16.34■□□□□ 0.21
SDCBP-201ENST00000260130 PDZD3Q86UT5 571 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 PYROXD1Q8WU10 500 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 TFGQ92734 400 aaPredicted RBP16.34■□□□□ 0.21
SDCBP-201ENST00000260130 GATA6Q92908 595 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 ATXN7L3BQ96GX2 97 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 SAYSD1Q9NPB0 183 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 NINJ2Q9NZG7 142 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 KNTC1P50748 2209 aa16.34■□□□□ 0.21
SDCBP-201ENST00000260130 CDH16O75309 829 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 GPC4O75487 556 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 UBXN7O94888 489 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 ATP6V1G2O95670 118 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 F7P08709 466 aaPredicted RBP16.33■□□□□ 0.2
SDCBP-201ENST00000260130 HOXB3P14651 431 aaPredicted RBP16.33■□□□□ 0.2
SDCBP-201ENST00000260130 NDUFS1P28331 727 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 CCKBRP32239 447 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 RIPK1Q13546 671 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 TMEM71Q6P5X7 295 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 RELL1Q8IUW5 271 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 SLITRK4Q8IW52 837 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 OR4D9Q8NGE8 314 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 GIMAP7Q8NHV1 300 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 NCSTNQ92542 709 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 FERD3LQ96RJ6 166 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 TMEM121BQ9BXQ6 578 aaPredicted RBP16.33■□□□□ 0.2
SDCBP-201ENST00000260130 NRSN2Q9GZP1 204 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 SEMA6CQ9H3T2 930 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 ABCF3Q9NUQ8 709 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 FGFR1OP2Q9NVK5 253 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 CDYLQ9Y232 598 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 ACTL7BQ9Y614 415 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 WDFY3Q8IZQ1 3526 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 HAUS5O94927 633 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 AMD1P17707 334 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 CHRM3P20309 590 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 ACADLP28330 430 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 CSF2RBP32927 897 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 LEPRP48357 1165 aaKnown RBP16.33■□□□□ 0.2
SDCBP-201ENST00000260130 MPP1Q00013 466 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 FRG1Q14331 258 aaKnown RBP16.33■□□□□ 0.2
SDCBP-201ENST00000260130 TEDDM1Q5T9Z0 273 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 TRMT10BQ6PF06 316 aaKnown RBP16.33■□□□□ 0.2
SDCBP-201ENST00000260130 WDR74Q6RFH5 385 aaPredicted RBP16.33■□□□□ 0.2
SDCBP-201ENST00000260130 OTOAQ7RTW8 1153 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 CNTN4Q8IWV2 1026 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 RIBC1Q8N443 379 aaPredicted RBP16.33■□□□□ 0.2
SDCBP-201ENST00000260130 ANKRD42Q8N9B4 389 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 C2CD4AQ8NCU7 369 aaPredicted RBP16.33■□□□□ 0.2
SDCBP-201ENST00000260130 PHC3Q8NDX5 983 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 PHACTR1Q9C0D0 580 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 STRADBQ9C0K7 418 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 KIR3DX1Q9H7L2 352 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 NKIRAS1Q9NYS0 192 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 ARL2BPQ9Y2Y0 163 aa16.33■□□□□ 0.2
SDCBP-201ENST00000260130 NIPSNAP2O75323 286 aa16.32■□□□□ 0.2
SDCBP-201ENST00000260130 SLCO2B1O94956 709 aa16.32■□□□□ 0.2
SDCBP-201ENST00000260130 PROS1P07225 676 aa16.32■□□□□ 0.2
SDCBP-201ENST00000260130 TYRP1P17643 537 aa16.32■□□□□ 0.2
SDCBP-201ENST00000260130 LIMK2P53671 638 aa16.32■□□□□ 0.2
SDCBP-201ENST00000260130 SF3A3Q12874 501 aaKnown RBP eCLIP16.32■□□□□ 0.2
SDCBP-201ENST00000260130 PLCL1Q15111 1095 aa16.32■□□□□ 0.2
SDCBP-201ENST00000260130 TMED2Q15363 201 aa16.32■□□□□ 0.2
SDCBP-201ENST00000260130 KIAA0408Q6ZU52 694 aa16.32■□□□□ 0.2
SDCBP-201ENST00000260130 SPATA21Q7Z572 469 aa16.32■□□□□ 0.2
SDCBP-201ENST00000260130 PALM2Q8IXS6 379 aa16.32■□□□□ 0.2
SDCBP-201ENST00000260130 SLC22A15Q8IZD6 547 aa16.32■□□□□ 0.2
SDCBP-201ENST00000260130 GSDMBQ8TAX9 411 aa16.32■□□□□ 0.2
SDCBP-201ENST00000260130 CCDC68Q9H2F9 335 aa16.32■□□□□ 0.2
SDCBP-201ENST00000260130 MVB12BQ9H7P6 319 aa16.32■□□□□ 0.2
SDCBP-201ENST00000260130 MOCS1Q9NZB8 636 aa16.32■□□□□ 0.2
SDCBP-201ENST00000260130 SLC24A2Q9UI40 661 aa16.32■□□□□ 0.2
SDCBP-201ENST00000260130 MCM8Q9UJA3 840 aa16.32■□□□□ 0.2
SDCBP-201ENST00000260130 FRYQ5TBA9 3013 aa16.32■□□□□ 0.2
SDCBP-201ENST00000260130 IGHV5-10-1A0A0J9YXX1 117 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 UBOX5O94941 541 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 STX2P32856 288 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 PHF19Q5T6S3 580 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 CNSTQ6PJW8 725 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 VRK3Q8IV63 474 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 LIN37Q96GY3 246 aaPredicted RBP16.31■□□□□ 0.2
SDCBP-201ENST00000260130 MAGEB18Q96M61 343 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 LATS2Q9NRM7 1088 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 TMEM9Q9P0T7 183 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 CTNNAL1Q9UBT7 734 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 ASF1AQ9Y294 204 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 PIKFYVEQ9Y2I7 2098 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 COL27A1Q8IZC6 1860 aaPredicted RBP16.31■□□□□ 0.2
SDCBP-201ENST00000260130 UNC13CQ8NB66 2214 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 E5RI56 91 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 ABHD2P08910 425 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 CREB1P16220 341 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 MPSTP25325 297 aa16.31■□□□□ 0.2
SDCBP-201ENST00000260130 RTP5Q14D33 572 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms