RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 SPESP1Q6UW49 350 aa18.39■□□□□ 0.54
TM6SF1-201ENST00000258909 HOOK3Q86VS8 718 aa18.39■□□□□ 0.54
TM6SF1-201ENST00000258909 SYTL1Q8IYJ3 562 aa18.39■□□□□ 0.54
TM6SF1-201ENST00000258909 OR6P1Q8NGX9 317 aa18.39■□□□□ 0.54
TM6SF1-201ENST00000258909 THAP4Q8WY91 577 aa18.39■□□□□ 0.54
TM6SF1-201ENST00000258909 SEC14L1Q92503 715 aa18.39■□□□□ 0.54
TM6SF1-201ENST00000258909 SLC7A5P2Q9GIP4 190 aa18.39■□□□□ 0.54
TM6SF1-201ENST00000258909 SYTL2Q9HCH5 934 aa18.39■□□□□ 0.54
TM6SF1-201ENST00000258909 SNX7Q9UNH6 387 aa18.39■□□□□ 0.54
TM6SF1-201ENST00000258909 CCDC88CQ9P219 2028 aa18.39■□□□□ 0.53
TM6SF1-201ENST00000258909 FER1L5A0AVI2 2057 aa18.39■□□□□ 0.53
TM6SF1-201ENST00000258909 QSOX1O00391 747 aa18.39■□□□□ 0.53
TM6SF1-201ENST00000258909 ZNF749O43361 778 aa18.39■□□□□ 0.53
TM6SF1-201ENST00000258909 HCRTR1O43613 425 aa18.39■□□□□ 0.53
TM6SF1-201ENST00000258909 CAPN1P07384 714 aa18.39■□□□□ 0.53
TM6SF1-201ENST00000258909 PTGIRP43119 386 aa18.39■□□□□ 0.53
TM6SF1-201ENST00000258909 ITGA1P56199 1179 aa18.39■□□□□ 0.53
TM6SF1-201ENST00000258909 ZIC1Q15915 447 aa18.39■□□□□ 0.53
TM6SF1-201ENST00000258909 KCTD19Q17RG1 926 aaPredicted RBP18.39■□□□□ 0.53
TM6SF1-201ENST00000258909 AFTPHQ6ULP2 937 aa18.39■□□□□ 0.53
TM6SF1-201ENST00000258909 ZNF534Q76KX8 674 aa18.39■□□□□ 0.53
TM6SF1-201ENST00000258909 LDB1Q86U70 411 aaPredicted RBP18.39■□□□□ 0.53
TM6SF1-201ENST00000258909 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.39■□□□□ 0.53
TM6SF1-201ENST00000258909 OR2A14Q96R47 310 aa18.39■□□□□ 0.53
TM6SF1-201ENST00000258909 ING2Q9H160 280 aa18.39■□□□□ 0.53
TM6SF1-201ENST00000258909 CASS4Q9NQ75 786 aa18.39■□□□□ 0.53
TM6SF1-201ENST00000258909 TCFL5Q9UL49 500 aa18.39■□□□□ 0.53
TM6SF1-201ENST00000258909 RP1L1Q8IWN7 2480 aaPredicted RBP18.38■□□□□ 0.53
TM6SF1-201ENST00000258909 NAV2Q8IVL1 2488 aa18.38■□□□□ 0.53
TM6SF1-201ENST00000258909 E7EQ34 232 aa18.38■□□□□ 0.53
TM6SF1-201ENST00000258909 APRTP07741 180 aa18.38■□□□□ 0.53
TM6SF1-201ENST00000258909 CTSBP07858 339 aa18.38■□□□□ 0.53
TM6SF1-201ENST00000258909 CHRM5P08912 532 aaPredicted RBP18.38■□□□□ 0.53
TM6SF1-201ENST00000258909 ADRA1DP25100 572 aa18.38■□□□□ 0.53
TM6SF1-201ENST00000258909 SHMT2P34897 504 aa18.38■□□□□ 0.53
TM6SF1-201ENST00000258909 FAM198BQ6UWH4 519 aa18.38■□□□□ 0.53
TM6SF1-201ENST00000258909 TBC1D21Q8IYX1 336 aa18.38■□□□□ 0.53
TM6SF1-201ENST00000258909 CCDC89Q8N998 374 aa18.38■□□□□ 0.53
TM6SF1-201ENST00000258909 C19orf47Q8N9M1 422 aaKnown RBP18.38■□□□□ 0.53
TM6SF1-201ENST00000258909 LMNTD1Q8N9Z9 388 aa18.38■□□□□ 0.53
TM6SF1-201ENST00000258909 OR4L1Q8NH43 312 aa18.38■□□□□ 0.53
TM6SF1-201ENST00000258909 OR5K2Q8NHB8 316 aa18.38■□□□□ 0.53
TM6SF1-201ENST00000258909 LKAAEAR1Q8TD35 194 aa18.38■□□□□ 0.53
TM6SF1-201ENST00000258909 ADAMTS17Q8TE56 1095 aa18.38■□□□□ 0.53
TM6SF1-201ENST00000258909 RANBP9Q96S59 729 aa18.38■□□□□ 0.53
TM6SF1-201ENST00000258909 NLNQ9BYT8 704 aa18.38■□□□□ 0.53
TM6SF1-201ENST00000258909 SPRTNQ9H040 489 aaPredicted RBP18.38■□□□□ 0.53
TM6SF1-201ENST00000258909 ACSS2Q9NR19 701 aa18.38■□□□□ 0.53
TM6SF1-201ENST00000258909 CIDEBQ9UHD4 219 aa18.38■□□□□ 0.53
TM6SF1-201ENST00000258909 IQCF5A8MTL0 148 aa18.37■□□□□ 0.53
TM6SF1-201ENST00000258909 RAB40ALP0C0E4 278 aa18.37■□□□□ 0.53
TM6SF1-201ENST00000258909 MSL3P1P0C860 447 aa18.37■□□□□ 0.53
TM6SF1-201ENST00000258909 CCR7P32248 378 aa18.37■□□□□ 0.53
TM6SF1-201ENST00000258909 LYPLAL1Q5VWZ2 237 aa18.37■□□□□ 0.53
TM6SF1-201ENST00000258909 VRK3Q8IV63 474 aa18.37■□□□□ 0.53
TM6SF1-201ENST00000258909 FAM20CQ8IXL6 584 aa18.37■□□□□ 0.53
TM6SF1-201ENST00000258909 FLVCR1-AS1Q8TAF5 88 aa18.37■□□□□ 0.53
TM6SF1-201ENST00000258909 N4BP2L2Q92802 583 aaPredicted RBP18.37■□□□□ 0.53
TM6SF1-201ENST00000258909 SLC25A23Q9BV35 468 aa18.37■□□□□ 0.53
TM6SF1-201ENST00000258909 FRMD8P1Q9BZ68 369 aaPredicted RBP18.37■□□□□ 0.53
TM6SF1-201ENST00000258909 TSGA10Q9BZW7 698 aa18.37■□□□□ 0.53
TM6SF1-201ENST00000258909 POLG2Q9UHN1 485 aa18.37■□□□□ 0.53
TM6SF1-201ENST00000258909 TCAF1Q9Y4C2 921 aa18.37■□□□□ 0.53
TM6SF1-201ENST00000258909 ISM1B1AKI9 464 aa18.36■□□□□ 0.53
TM6SF1-201ENST00000258909 KRT86O43790 486 aa18.36■□□□□ 0.53
TM6SF1-201ENST00000258909 RPL22P35268 128 aaKnown RBP18.36■□□□□ 0.53
TM6SF1-201ENST00000258909 PRAMEP78395 509 aa18.36■□□□□ 0.53
TM6SF1-201ENST00000258909 ACVR1Q04771 509 aa18.36■□□□□ 0.53
TM6SF1-201ENST00000258909 HSPA14Q0VDF9 509 aa18.36■□□□□ 0.53
TM6SF1-201ENST00000258909 RPS6KA1Q15418 735 aa18.36■□□□□ 0.53
TM6SF1-201ENST00000258909 FASTKD1Q53R41 847 aaKnown RBP18.36■□□□□ 0.53
TM6SF1-201ENST00000258909 MEI1Q5TIA1 1274 aa18.36■□□□□ 0.53
TM6SF1-201ENST00000258909 C1orf189Q5VU69 101 aa18.36■□□□□ 0.53
TM6SF1-201ENST00000258909 GPR135Q8IZ08 494 aa18.36■□□□□ 0.53
TM6SF1-201ENST00000258909 KRT222Q8N1A0 295 aa18.36■□□□□ 0.53
TM6SF1-201ENST00000258909 C2orf73Q8N5S3 287 aaPredicted RBP18.36■□□□□ 0.53
TM6SF1-201ENST00000258909 CFAP61Q8NHU2 1237 aa18.36■□□□□ 0.53
TM6SF1-201ENST00000258909 TTC1Q99614 292 aa18.36■□□□□ 0.53
TM6SF1-201ENST00000258909 CHRAC1Q9NRG0 131 aa18.36■□□□□ 0.53
TM6SF1-201ENST00000258909 KLHL20Q9Y2M5 609 aa18.36■□□□□ 0.53
TM6SF1-201ENST00000258909 UTP20O75691 2785 aaKnown RBP18.35■□□□□ 0.53
TM6SF1-201ENST00000258909 OR2B3O76000 313 aa18.35■□□□□ 0.53
TM6SF1-201ENST00000258909 CBSLP0DN79 551 aa18.35■□□□□ 0.53
TM6SF1-201ENST00000258909 PEBP1P30086 187 aaKnown RBP18.35■□□□□ 0.53
TM6SF1-201ENST00000258909 CBSP35520 551 aa18.35■□□□□ 0.53
TM6SF1-201ENST00000258909 PGDP52209 483 aa18.35■□□□□ 0.53
TM6SF1-201ENST00000258909 SESN2P58004 480 aaPredicted RBP18.35■□□□□ 0.53
TM6SF1-201ENST00000258909 CRADDP78560 199 aa18.35■□□□□ 0.53
TM6SF1-201ENST00000258909 NCF4Q15080 339 aa18.35■□□□□ 0.53
TM6SF1-201ENST00000258909 SIX1Q15475 284 aaPredicted RBP18.35■□□□□ 0.53
TM6SF1-201ENST00000258909 PPHLN1Q8NEY8 458 aaKnown RBP18.35■□□□□ 0.53
TM6SF1-201ENST00000258909 TCTN2Q96GX1 697 aa18.35■□□□□ 0.53
TM6SF1-201ENST00000258909 AP1M1Q9BXS5 423 aa18.35■□□□□ 0.53
TM6SF1-201ENST00000258909 OR6C2Q9NZP2 312 aa18.35■□□□□ 0.53
TM6SF1-201ENST00000258909 PAK5Q9P286 719 aa18.35■□□□□ 0.53
TM6SF1-201ENST00000258909 MARCH4Q9P2E8 410 aaPredicted RBP18.35■□□□□ 0.53
TM6SF1-201ENST00000258909 RIMKLBQ9ULI2 386 aa18.35■□□□□ 0.53
TM6SF1-201ENST00000258909 PCSK5Q92824 1860 aa18.35■□□□□ 0.53
TM6SF1-201ENST00000258909 A0A0J9YY10 115 aa18.34■□□□□ 0.53
TM6SF1-201ENST00000258909 A6NL46 340 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms