RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 FNIP2Q9P278 1114 aa11.28□□□□□ -0.6
TROAP-201ENST00000257909 BTBD3Q9Y2F9 522 aa11.28□□□□□ -0.6
TROAP-201ENST00000257909 POLR3HQ9Y535 204 aaPredicted RBP11.28□□□□□ -0.6
TROAP-201ENST00000257909 KCTD3Q9Y597 815 aa11.28□□□□□ -0.6
TROAP-201ENST00000257909 LYVE1Q9Y5Y7 322 aa11.28□□□□□ -0.6
TROAP-201ENST00000257909 PTCH2Q9Y6C5 1203 aa11.28□□□□□ -0.6
TROAP-201ENST00000257909 NCF1BA6NI72 391 aaPredicted RBP11.27□□□□□ -0.61
TROAP-201ENST00000257909 NCF1CA8MVU1 366 aaPredicted RBP11.27□□□□□ -0.61
TROAP-201ENST00000257909 HHLA1C9JL84 531 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 CDC7O00311 574 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 ENPP3O14638 875 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 CAPN5O15484 640 aaPredicted RBP11.27□□□□□ -0.61
TROAP-201ENST00000257909 PAGE1O75459 146 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 USP2O75604 605 aaPredicted RBP11.27□□□□□ -0.61
TROAP-201ENST00000257909 RPP40O75818 363 aaKnown RBP11.27□□□□□ -0.61
TROAP-201ENST00000257909 TRAPPC2P0DI81 140 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 TRAPPC2BP0DI82 140 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 NCF1P14598 390 aaPredicted RBP11.27□□□□□ -0.61
TROAP-201ENST00000257909 GADD45AP24522 165 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 MAGEA11P43364 429 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 SLC15A1P46059 708 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 BAG6P46379 1132 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 GMPSP49915 693 aaPredicted RBP11.27□□□□□ -0.61
TROAP-201ENST00000257909 SEMA3AQ14563 771 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 PCBP1Q15365 356 aaKnown RBP eCLIP11.27□□□□□ -0.61
TROAP-201ENST00000257909 TBCEQ15813 527 aaPredicted RBP11.27□□□□□ -0.61
TROAP-201ENST00000257909 TIGD6Q17RP2 521 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 AP5B1Q2VPB7 878 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 NLGN4XQ8N0W4 816 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 GLB1L3Q8NCI6 653 aaPredicted RBP11.27□□□□□ -0.61
TROAP-201ENST00000257909 OR4L1Q8NH43 312 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 METTL6Q8TCB7 284 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 BHMTQ93088 406 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 KLRG1Q96E93 195 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 PCED1BQ96HM7 432 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 ST6GAL2Q96JF0 529 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 IKZF5Q9H5V7 419 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 ITM2CQ9NQX7 267 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.27□□□□□ -0.61
TROAP-201ENST00000257909 SATB2Q9UPW6 733 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 GINS2Q9Y248 185 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 GBF1Q92538 1859 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 BTN3A1O00481 513 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 E2F3O00716 465 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 CRYZL1O95825 349 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 PEX11BO96011 259 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 IGLV3-25P01717 112 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 IL6P05231 212 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 MMP2P08253 660 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 SOX6P35712 828 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 ERVPABLB-1P60509 514 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 MAXP61244 160 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 RACK1P63244 317 aaKnown RBP11.27□□□□□ -0.61
TROAP-201ENST00000257909 ARHGAP1Q07960 439 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 C19orf57Q0VDD7 668 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 EIF4EBP2Q13542 120 aaPredicted RBP11.27□□□□□ -0.61
TROAP-201ENST00000257909 DDR2Q16832 855 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 MARC1Q5VT66 337 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 OR2T5Q6IEZ7 315 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 SLC46A3Q7Z3Q1 461 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 CHCHD4Q8N4Q1 142 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 PAF1Q8N7H5 531 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 OR2T29Q8NH02 315 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 DNAJB8Q8NHS0 232 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 NETO1Q8TDF5 533 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 FCRL2Q96LA5 508 aaPredicted RBP11.27□□□□□ -0.61
TROAP-201ENST00000257909 PPP3R2Q96LZ3 170 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 PDGFCQ9NRA1 345 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 TRMT13Q9NUP7 481 aaKnown RBP11.27□□□□□ -0.61
TROAP-201ENST00000257909 IKZF3Q9UKT9 509 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 FAM50BQ9Y247 325 aa11.27□□□□□ -0.61
TROAP-201ENST00000257909 LOC285095A0A1B0GVY8 99 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 UBA6A0AVT1 1052 aaPredicted RBP11.26□□□□□ -0.61
TROAP-201ENST00000257909 NPEPPSL1A6NEC2 478 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 M0R082 166 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 MUSKO15146 869 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 IRAK2O43187 625 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 SLC25A27O95847 323 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 ABCB1P08183 1280 aaPredicted RBP11.26□□□□□ -0.61
TROAP-201ENST00000257909 DNAJA1P31689 397 aaKnown RBP11.26□□□□□ -0.61
TROAP-201ENST00000257909 LHX1P48742 406 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 CDC42EP1Q00587 391 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 DSC2Q02487 901 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 MAD2L1Q13257 205 aaPredicted RBP11.26□□□□□ -0.61
TROAP-201ENST00000257909 GPR50Q13585 617 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 FBXO43Q4G163 708 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 GCNT7Q6ZNI0 430 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 RFPL4BQ6ZWI9 263 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 P3H2Q8IVL5 708 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 PIAS4Q8N2W9 510 aaPredicted RBP11.26□□□□□ -0.61
TROAP-201ENST00000257909 SMARCD1Q96GM5 515 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 PITX2Q99697 317 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 COPS4Q9BT78 406 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 CLPBQ9H078 707 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 C1orf109Q9NX04 203 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 ADPRHL2Q9NX46 363 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 QPCTLQ9NXS2 382 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 VNN3Q9NY84 501 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 TAS2R9Q9NYW1 312 aa11.26□□□□□ -0.61
TROAP-201ENST00000257909 SLC25A37Q9NYZ2 338 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms