RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 MEIOBQ8N635 442 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 CCNB2O95067 398 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 CLDN7O95471 211 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 NPY5RQ15761 445 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 OR2L5Q8NG80 312 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 DPYSL5Q9BPU6 564 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 KCTD3Q9Y597 815 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 PDPK1O15530 556 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 HEPACAMQ14CZ8 416 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 TMC8Q8IU68 726 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 PIGXQ8TBF5 258 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 SUV39H2Q9H5I1 410 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 COPS7AQ9UBW8 275 aa18.36■□□□□ 0.53
SMARCC1-201ENST00000254480 GADD45GO95257 159 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 C8GP07360 202 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 PTP4A2Q12974 167 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 TARDBPQ13148 414 aaKnown RBP eCLIP18.35■□□□□ 0.531e-6■■■■□ 22.6
SMARCC1-201ENST00000254480 DCAF12L1Q5VU92 463 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 MSL3Q8N5Y2 521 aaKnown RBP18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 BANPQ8N9N5 519 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 UNC93B1Q9H1C4 597 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 ELAC1Q9H777 363 aaKnown RBP18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 BRD7Q9NPI1 651 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 NFKBIEO00221 500 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 PCDH7O60245 1069 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 RSL1D1O76021 490 aaKnown RBP18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 GNAZP19086 355 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 SLBPQ14493 270 aaKnown RBP eCLIP18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 CYP27C1Q4G0S4 372 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 GDPD4Q6W3E5 623 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 TAPBPLQ9BX59 468 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 CADM1Q9BY67 442 aaKnown RBP18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 PLEKHA1Q9HB21 404 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 DMTF1Q9Y222 760 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 DNM1LO00429 736 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 FMO3P31513 532 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 GDF5P43026 501 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 AQP4P55087 323 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 OR5M3Q8NGP4 307 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 OR6K6Q8NGW6 343 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 GFM1Q96RP9 751 aaKnown RBP18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 IFT27Q9BW83 186 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 POLMQ9NP87 494 aaPredicted RBP18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 FOXN2P32314 431 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 WNT9AO14904 365 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 PDHA2P29803 388 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 DPYSL2Q16555 572 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 SATL1Q86VE3 508 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 SLC13A3Q8WWT9 602 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 DUSP26Q9BV47 211 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 TMEM98Q9Y2Y6 226 aa18.35■□□□□ 0.53
SMARCC1-201ENST00000254480 DHPSP49366 369 aaPredicted RBP18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 GRM2Q14416 872 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 GPR68Q15743 365 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 WDR26Q9H7D7 661 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 SLC7A4O43246 635 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 HLA-EP13747 358 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 SLC9A4Q6AI14 798 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 CLDN19Q8N6F1 224 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 CNTD1Q8N815 330 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 TOP1MTQ969P6 601 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 COQ10BQ9H8M1 238 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 PNPLA8Q9NP80 782 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 WBP11Q9Y2W2 641 aaKnown RBP18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 SRRM3A6NNA2 597 aaPredicted RBP18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 AGPSO00116 658 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 FPGSQ05932 587 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 FATE1Q969F0 183 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 C11orf84Q9BUA3 381 aaPredicted RBP18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 MMP20O60882 483 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 HTR7P34969 479 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 CEBPGP53567 150 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 IGSF9Q9P2J2 1179 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 HS3ST4Q9Y661 456 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 CLCNKAP51800 687 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 ZNF280AP59817 542 aaPredicted RBP18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 TLR1Q15399 786 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 TOR1AIP1Q5JTV8 583 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 GMEB2Q9UKD1 530 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 ING4Q9UNL4 249 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 SLC22A14Q9Y267 594 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 COMMD3-BMI1R4GMX3 469 aa18.34■□□□□ 0.53
SMARCC1-201ENST00000254480 FAM240BA0A1B0GVZ2 78 aa18.33■□□□□ 0.53
SMARCC1-201ENST00000254480 ASLP04424 464 aa18.33■□□□□ 0.53
SMARCC1-201ENST00000254480 GRASPQ7Z6J2 395 aaPredicted RBP18.33■□□□□ 0.53
SMARCC1-201ENST00000254480 KERAO60938 352 aa18.33■□□□□ 0.53
SMARCC1-201ENST00000254480 SNX4O95219 450 aa18.33■□□□□ 0.53
SMARCC1-201ENST00000254480 KLK1P06870 262 aa18.33■□□□□ 0.53
SMARCC1-201ENST00000254480 LYNP07948 512 aa18.33■□□□□ 0.53
SMARCC1-201ENST00000254480 FSHRP23945 695 aa18.33■□□□□ 0.53
SMARCC1-201ENST00000254480 DGKQP52824 942 aa18.33■□□□□ 0.53
SMARCC1-201ENST00000254480 TXNL4AP83876 142 aaKnown RBP18.33■□□□□ 0.53
SMARCC1-201ENST00000254480 S100ZQ8WXG8 99 aa18.33■□□□□ 0.53
SMARCC1-201ENST00000254480 MCCC1Q96RQ3 725 aaPredicted RBP18.33■□□□□ 0.53
SMARCC1-201ENST00000254480 GTPBP2Q9BX10 602 aaKnown RBP18.33■□□□□ 0.53
SMARCC1-201ENST00000254480 PCDHGA3Q9Y5H0 932 aa18.33■□□□□ 0.53
SMARCC1-201ENST00000254480 PCDHGA11Q9Y5H2 935 aa18.33■□□□□ 0.53
SMARCC1-201ENST00000254480 AFDNP55196 1824 aaKnown RBP18.33■□□□□ 0.52
SMARCC1-201ENST00000254480 FAM172BPA6NC97 362 aa18.33■□□□□ 0.52
SMARCC1-201ENST00000254480 ECI2O75521 394 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms