RNA–Protein interactions for RNA: ENST00000254181.8

USP29-201, Transcript of ubiquitin specific peptidase 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP29, Length 3,705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP29-201ENST00000254181 FAM49AQ9H0Q0 323 aaPredicted RBP7.54□□□□□ -1.2
USP29-201ENST00000254181 KLHL31Q9H511 634 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 ZFP14Q9HCL3 533 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 DNAJB9Q9UBS3 223 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 MYH14Q7Z406 1995 aaKnown RBP7.54□□□□□ -1.2
USP29-201ENST00000254181 TRPM2O94759 1503 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.54□□□□□ -1.2
USP29-201ENST00000254181 TEX13CA0A0J9YWL9 993 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 CAPN5O15484 640 aaPredicted RBP7.54□□□□□ -1.2
USP29-201ENST00000254181 PDE8BO95263 885 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 FTH1P02794 183 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 BMP2P12643 396 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 MPSTP25325 297 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 ARCN1P48444 511 aaKnown RBP7.54□□□□□ -1.2
USP29-201ENST00000254181 CABP4P57796 275 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 ZNF177Q13360 481 aaPredicted RBP7.54□□□□□ -1.2
USP29-201ENST00000254181 MSS51Q4VC12 460 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 STRIP1Q5VSL9 837 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 TMPRSS11AQ6ZMR5 421 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 ZNF782Q6ZMW2 699 aaPredicted RBP7.54□□□□□ -1.2
USP29-201ENST00000254181 STRADAQ7RTN6 431 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 ZNF720Q7Z2F6 126 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 TRMT1LQ7Z2T5 733 aaKnown RBP7.54□□□□□ -1.2
USP29-201ENST00000254181 FAM174AQ8TBP5 190 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 PTP4A1Q93096 173 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 CCDC126Q96EE4 140 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 TMUB1Q9BVT8 246 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 TEKT3Q9BXF9 490 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 SLC19A3Q9BZV2 496 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 QRSL1Q9H0R6 528 aaKnown RBP7.54□□□□□ -1.2
USP29-201ENST00000254181 MED28Q9H204 178 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 PCIF1Q9H4Z3 704 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 ZBTB3Q9H5J0 574 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 MKNK2Q9HBH9 465 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 TREM1Q9NP99 234 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 SAE1Q9UBE0 346 aaPredicted RBP7.54□□□□□ -1.2
USP29-201ENST00000254181 SEPT9Q9UHD8 586 aaPredicted RBP7.54□□□□□ -1.2
USP29-201ENST00000254181 LYVE1Q9Y5Y7 322 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 CNTNAP5Q8WYK1 1306 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 TSPAN19P0C672 248 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 PRR35P0CG20 571 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 BMP1P13497 986 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 PHKG2P15735 406 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 SSTR2P30874 369 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 SFNP31947 248 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 PPM1AP35813 382 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 TGFBR1P36897 503 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 PREPP48147 710 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 RFX5P48382 616 aaPredicted RBP7.54□□□□□ -1.2
USP29-201ENST00000254181 HARS2P49590 506 aaKnown RBP7.54□□□□□ -1.2
USP29-201ENST00000254181 RAB13P51153 203 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 SMSP52788 366 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 INCA1Q0VD86 236 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 KCNC3Q14003 757 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 SEC23BQ15437 767 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 FAM189A2Q15884 450 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 FSCN1Q16658 493 aaKnown RBP7.54□□□□□ -1.2
USP29-201ENST00000254181 TEX44Q53QW1 395 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 C6orf141Q5SZD1 244 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 CATSPERGQ6ZRH7 1159 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 ADGRF4Q8IZF3 695 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 C4orf32Q8N8J7 132 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 KAT5Q92993 513 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 LPPQ93052 612 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.54□□□□□ -1.2
USP29-201ENST00000254181 OTULINQ96BN8 352 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 RERGLQ9H628 205 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 NIPAL2Q9H841 368 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 ZBTB20Q9HC78 741 aaPredicted RBP7.54□□□□□ -1.2
USP29-201ENST00000254181 SNTG1Q9NSN8 517 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 HCN3Q9P1Z3 774 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 SEC14L4Q9UDX3 406 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 MIOXQ9UGB7 285 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 DCDC2Q9UHG0 476 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 SLC9A8Q9Y2E8 581 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 DISP2A7MBM2 1401 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 EDC4Q6P2E9 1401 aaKnown RBP7.54□□□□□ -1.2
USP29-201ENST00000254181 A2ML1A8K2U0 1454 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 ANKRD12Q6UB98 2062 aa7.54□□□□□ -1.2
USP29-201ENST00000254181 ADGRB3O60242 1522 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 A0A1B0GW55 424 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 NR5A2O00482 541 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 PER2O15055 1255 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 LRIG2O94898 1065 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 VNN1O95497 513 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 PSAPP07602 524 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 RPS17P08708 135 aaKnown RBP7.53□□□□□ -1.2
USP29-201ENST00000254181 UQCRFS1P1P0C7P4 283 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 DUX4L2P0CJ85 424 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 DUX4L3P0CJ86 424 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 DUX4L4P0CJ87 422 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 DUX4L5P0CJ88 424 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 DUX4L6P0CJ89 424 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 DUX4L7P0CJ90 424 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 UMPSP11172 480 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 JUNBP17275 347 aaPredicted RBP7.53□□□□□ -1.2
USP29-201ENST00000254181 GJA1P17302 382 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 SYN1P17600 705 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 PTAFRP25105 342 aa7.53□□□□□ -1.2
USP29-201ENST00000254181 FMO3P31513 532 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms