RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 LCN9Q8WX39 176 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 DCUN1D1Q96GG9 259 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 DNAJC1Q96KC8 554 aaKnown RBP9.99□□□□□ -0.81
VPS50-201ENST00000251739 PPP1R2P1Q96PQ5 205 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 TRAPPC9Q96Q05 1148 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 TBL1YQ9BQ87 522 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 OSBPL8Q9BZF1 889 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 CHRNA10Q9GZZ6 450 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 SRMSQ9H3Y6 488 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 TSPY26PQ9H489 355 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 FAM96AQ9H5X1 160 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 MVB12BQ9H7P6 319 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 ACTR5Q9H9F9 607 aaPredicted RBP9.99□□□□□ -0.81
VPS50-201ENST00000251739 FANCEQ9HB96 536 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 ZDHHC3Q9NYG2 299 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 SNX7Q9UNH6 387 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 PCDHA13Q9Y5I0 950 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 CACNA1DQ01668 2161 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 SVILO95425 2214 aa9.99□□□□□ -0.81
VPS50-201ENST00000251739 CCDC66A2RUB6 948 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 GSAPA4D1B5 854 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 DDX3YO15523 660 aaKnown RBP9.98□□□□□ -0.81
VPS50-201ENST00000251739 KCNN4O15554 427 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 HCRTR1O43613 425 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 KLF7O75840 302 aaPredicted RBP9.98□□□□□ -0.81
VPS50-201ENST00000251739 STK10O94804 968 aaKnown RBP9.98□□□□□ -0.81
VPS50-201ENST00000251739 TMEM63AO94886 807 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 GSTM1P09488 218 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 PRSS56P0CW18 603 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 PVRP15151 417 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 GNLYP22749 145 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 CTNNA2P26232 953 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 MC4RP32245 332 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 PREPP48147 710 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 LMAN1P49257 510 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 VAV2P52735 878 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 GSTM4Q03013 218 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 DBN1Q16643 649 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 PTCHD3Q3KNS1 767 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 PRR30Q53SZ7 412 aaPredicted RBP9.98□□□□□ -0.81
VPS50-201ENST00000251739 SPESP1Q6UW49 350 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 CDHR3Q6ZTQ4 885 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 SERPINA9Q86WD7 417 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 HPS6Q86YV9 775 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 CLDN19Q8N6F1 224 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 RNF214Q8ND24 703 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 FAM118BQ9BPY3 351 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 DPH2Q9BQC3 489 aaPredicted RBP9.98□□□□□ -0.81
VPS50-201ENST00000251739 NUDT9Q9BW91 350 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 ACSS2Q9NR19 701 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 NLE1Q9NVX2 485 aaPredicted RBP9.98□□□□□ -0.81
VPS50-201ENST00000251739 ICKQ9UPZ9 632 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 REXO2Q9Y3B8 237 aaKnown RBP9.98□□□□□ -0.81
VPS50-201ENST00000251739 ZNF451Q9Y4E5 1061 aa9.98□□□□□ -0.81
VPS50-201ENST00000251739 MACROD2A1Z1Q3 448 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 TTLL8A6PVC2 850 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 BTNL10A8MVZ5 291 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 C2orf74A8MZ97 194 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 ZNF189O75820 626 aaPredicted RBP9.97□□□□□ -0.81
VPS50-201ENST00000251739 AP2A2O94973 939 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 RNF224P0DH78 156 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 TPBGLP0DKB5 382 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 CYP2A7P20853 494 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 ACADLP28330 430 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 CCL11P51671 97 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 TMPRSS15P98073 1019 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 KLF1Q13351 362 aaPredicted RBP9.97□□□□□ -0.81
VPS50-201ENST00000251739 ATP1A4Q13733 1029 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 SPARCL1Q14515 664 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 PRPSAP1Q14558 356 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 ZIC1Q15915 447 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 SKOR2Q2VWA4 1001 aaPredicted RBP9.97□□□□□ -0.81
VPS50-201ENST00000251739 CCDC181Q5TID7 509 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 SLC6A19Q695T7 634 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 JMJD6Q6NYC1 403 aaPredicted RBP9.97□□□□□ -0.81
VPS50-201ENST00000251739 AADACL2Q6P093 401 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 PACS1Q6VY07 963 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 MED25Q71SY5 747 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 MRGPREQ86SM8 312 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 AMIGO1Q86WK6 493 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 LINC00528Q8N1L1 170 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 RBMXL3Q8N7X1 1067 aaKnown RBP9.97□□□□□ -0.81
VPS50-201ENST00000251739 TMEM102Q8N9M5 508 aaPredicted RBP9.97□□□□□ -0.81
VPS50-201ENST00000251739 FDCSPQ8NFU4 85 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 TFGQ92734 400 aaPredicted RBP9.97□□□□□ -0.81
VPS50-201ENST00000251739 CLIP3Q96DZ5 547 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 SMAD5Q99717 465 aaKnown RBP9.97□□□□□ -0.81
VPS50-201ENST00000251739 FERMT1Q9BQL6 677 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 HGH1Q9BTY7 390 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 DHRS4Q9BTZ2 278 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 VPS37BQ9H9H4 285 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 FAM60AQ9NP50 221 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 ACTR10Q9NZ32 417 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 DUSP10Q9Y6W6 482 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 ZGRF1Q86YA3 2104 aa9.97□□□□□ -0.81
VPS50-201ENST00000251739 MROH6A6NGR9 719 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 IFRD1O00458 451 aaPredicted RBP9.96□□□□□ -0.82
VPS50-201ENST00000251739 LIN7AO14910 233 aaPredicted RBP9.96□□□□□ -0.82
VPS50-201ENST00000251739 ZNF749O43361 778 aa9.96□□□□□ -0.82
VPS50-201ENST00000251739 DPM1O60762 260 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms