RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 E5RI56 91 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 K7ENP7 123 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 BTN3A3O00478 584 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 TP73O15350 636 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 RAD1O60671 282 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 STK17BO94768 372 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 S1PR4O95977 384 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 POLR2CP19387 275 aaPredicted RBP12.38□□□□□ -0.43
VPREB3-201ENST00000248948 CDH3P22223 829 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 FMO4P31512 558 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 CCNFP41002 786 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 ITGA8P53708 1063 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 CSE1LP55060 971 aaKnown RBP12.38□□□□□ -0.43
VPREB3-201ENST00000248948 ARL4CP56559 192 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 CXADRP78310 365 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 SH3BP2P78314 561 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 CKAP4Q07065 602 aaKnown RBP12.38□□□□□ -0.43
VPREB3-201ENST00000248948 CBLBQ13191 982 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 PRKG2Q13237 762 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 FRG1Q14331 258 aaKnown RBP12.38□□□□□ -0.43
VPREB3-201ENST00000248948 TGIF1Q15583 401 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 TTLL9Q3SXZ7 439 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 MSS51Q4VC12 460 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 MANEAQ5SRI9 462 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 TMTC4Q5T4D3 741 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 INO80CQ6PI98 192 aaPredicted RBP12.38□□□□□ -0.43
VPREB3-201ENST00000248948 SPESP1Q6UW49 350 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 CCDC81Q6ZN84 652 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 KIAA0408Q6ZU52 694 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 MAATS1Q7Z4T9 603 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 GALNT7Q86SF2 657 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 DENND6AQ8IWF6 608 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 ADGRF3Q8IZF5 1079 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 NLGN4XQ8N0W4 816 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 ZBTB2Q8N680 514 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 NLGN4YQ8NFZ3 816 aaPredicted RBP12.38□□□□□ -0.43
VPREB3-201ENST00000248948 OR8K5Q8NH50 307 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 NKD1Q969G9 470 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 CERS2Q96G23 380 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 CRELD1Q96HD1 420 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 CTRCQ99895 268 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 MENTQ9BUN1 341 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 ULBP3Q9BZM4 244 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 SPRY4Q9C004 299 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 CCDC68Q9H2F9 335 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 FANCEQ9HB96 536 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 SYTL2Q9HCH5 934 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 SOHLH2Q9NX45 425 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 ACTR10Q9NZ32 417 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 TEX264Q9Y6I9 313 aa12.38□□□□□ -0.43
VPREB3-201ENST00000248948 MGAQ8IWI9 3026 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 E7ESA3 106 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 EIF3FO00303 357 aaPredicted RBP12.37□□□□□ -0.43
VPREB3-201ENST00000248948 CHRM5P08912 532 aaPredicted RBP12.37□□□□□ -0.43
VPREB3-201ENST00000248948 EBLN1P0CF75 366 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 MAP4P27816 1152 aaKnown RBP12.37□□□□□ -0.43
VPREB3-201ENST00000248948 PRDX3P30048 256 aaKnown RBP12.37□□□□□ -0.43
VPREB3-201ENST00000248948 TUBB4BP68371 445 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 C2orf54Q08AI8 447 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 CALCOCO2Q13137 446 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 CTBP1Q13363 440 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 TUBB2AQ13885 445 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 KIR2DS3Q14952 304 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 KYNUQ16719 465 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 BBS9Q3SYG4 887 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 HSP90AA5PQ58FG0 334 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 STEAP4Q687X5 459 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 TTC23LQ6PF05 361 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 UNC5AQ6ZN44 842 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 NEK10Q6ZWH5 1172 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 CACNA2D3Q8IZS8 1091 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 RAB42Q8N4Z0 105 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 ESX1Q8N693 406 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 C2CD4AQ8NCU7 369 aaPredicted RBP12.37□□□□□ -0.43
VPREB3-201ENST00000248948 MAGEC3Q8TD91 643 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 C16orf45Q96MC5 204 aaPredicted RBP12.37□□□□□ -0.43
VPREB3-201ENST00000248948 FOPNLQ96NB1 174 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 WDR83Q9BRX9 315 aaKnown RBP12.37□□□□□ -0.43
VPREB3-201ENST00000248948 TUBB2BQ9BVA1 445 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 XKR8Q9H6D3 395 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 CPNE5Q9HCH3 593 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 FBXO6Q9NRD1 293 aaPredicted RBP12.37□□□□□ -0.43
VPREB3-201ENST00000248948 FGF21Q9NSA1 209 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 WHRNQ9P202 907 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 ZC3H7BQ9UGR2 993 aaKnown RBP12.37□□□□□ -0.43
VPREB3-201ENST00000248948 FBXO5Q9UKT4 447 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 RARRES3Q9UL19 164 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 CHMP2BQ9UQN3 213 aa12.37□□□□□ -0.43
VPREB3-201ENST00000248948 TDRKHQ9Y2W6 561 aaKnown RBP12.37□□□□□ -0.43
VPREB3-201ENST00000248948 A0A0J9YY10 115 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 RASGRF2O14827 1237 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 MAP3K7O43318 606 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 BANF1O75531 89 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 MATN4O95460 622 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 MT-ND3P03897 115 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 TPBGLP0DKB5 382 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 ENO3P13929 434 aaPredicted RBP12.36□□□□□ -0.43
VPREB3-201ENST00000248948 FOLR1P15328 257 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 UGT2B7P16662 529 aa12.36□□□□□ -0.43
VPREB3-201ENST00000248948 CHRM3P20309 590 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms