RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 PRH1P02810 166 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 EIF1AXP47813 144 aaKnown RBP7.39□□□□□ -1.23
RIF1-201ENST00000243326 VGLL4Q14135 290 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 POGLUT1Q8NBL1 392 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 AHSPQ9NZD4 102 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 EDARQ9UNE0 448 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 DLG5Q8TDM6 1919 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 H0YJX3 145 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 SLC30A4O14863 429 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 DLX3O60479 287 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 CORO1AP31146 461 aaKnown RBP7.39□□□□□ -1.23
RIF1-201ENST00000243326 KIR3DL1P43629 444 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 PAQR3Q6TCH7 311 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 CRELD1Q96HD1 420 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 TWNKQ96RR1 684 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 HOPXQ9BPY8 73 aaPredicted RBP7.39□□□□□ -1.23
RIF1-201ENST00000243326 SAMD4AQ9UPU9 718 aaKnown RBP7.39□□□□□ -1.23
RIF1-201ENST00000243326 TNPO3Q9Y5L0 923 aaKnown RBP7.39□□□□□ -1.23
RIF1-201ENST00000243326 DNTTP04053 509 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 S100A10P60903 97 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 SKP1P63208 163 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 SGCGQ13326 291 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 ASTE1Q2TB18 679 aaPredicted RBP7.39□□□□□ -1.23
RIF1-201ENST00000243326 FAM180BQ6P0A1 224 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 MSANTD2Q6P1R3 559 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 ATAD1Q8NBU5 361 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 FGF10O15520 208 aaPredicted RBP7.39□□□□□ -1.23
RIF1-201ENST00000243326 HTRA2O43464 458 aaPredicted RBP7.39□□□□□ -1.23
RIF1-201ENST00000243326 OR1F1O43749 312 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 GNALP38405 381 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 SLC9A3P48764 834 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 TTPAP49638 278 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 BMT2Q1RMZ1 405 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 COLGALT2Q8IYK4 626 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 ADGRG2Q8IZP9 1017 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 SLC6A15Q9H2J7 730 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 PNPLA8Q9NP80 782 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 MCIDASD6RGH6 385 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 WNT10BO00744 389 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 FBP2O00757 339 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 PRSS56P0CW18 603 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 GSK3BP49841 420 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 ZNF132P52740 706 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 PURAQ00577 322 aaKnown RBP7.39□□□□□ -1.23
RIF1-201ENST00000243326 ANKDD1AQ495B1 522 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 SIRPB2Q5JXA9 342 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 C1orf127Q8N9H9 656 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 CD101Q93033 1021 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 C13orf42A0A1B0GVH6 325 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 ACOX3O15254 700 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 AP2A1O95782 977 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 RAP2AP10114 183 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 PKMP14618 531 aaKnown RBP7.39□□□□□ -1.23
RIF1-201ENST00000243326 CTC1Q2NKJ3 1217 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 SCGB2B2Q4G0G5 96 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 MBOAT1Q6ZNC8 495 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 IKBIPQ70UQ0 350 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 TP63Q9H3D4 680 aaPredicted RBP7.39□□□□□ -1.23
RIF1-201ENST00000243326 A0A1B0GVC2 190 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 A6NIN4 97 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 CD8B2A6NJW9 211 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 CILPO75339 1184 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 ECDO95905 644 aaPredicted RBP7.39□□□□□ -1.23
RIF1-201ENST00000243326 CD8BP10966 210 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 ALDH3A2P51648 485 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 OR2L5Q8NG80 312 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 OR5K1Q8NHB7 308 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 MCCC1Q96RQ3 725 aaPredicted RBP7.39□□□□□ -1.23
RIF1-201ENST00000243326 HIPK3Q9H422 1215 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 PDZD7Q9H5P4 517 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 NUP214P35658 2090 aaPredicted RBP7.39□□□□□ -1.23
RIF1-201ENST00000243326 SSTR4P31391 388 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 HOXD13P35453 343 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 USF2Q15853 346 aaPredicted RBP7.39□□□□□ -1.23
RIF1-201ENST00000243326 VSIG10LQ86VR7 867 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 SPNS2Q8IVW8 549 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 HEPHQ9BQS7 1158 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 DNMT3LQ9UJW3 386 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 GIT1Q9Y2X7 761 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 PTPRJQ12913 1337 aa7.39□□□□□ -1.23
RIF1-201ENST00000243326 ENGP17813 658 aa7.38□□□□□ -1.23
RIF1-201ENST00000243326 BDKRB1P46663 353 aa7.38□□□□□ -1.23
RIF1-201ENST00000243326 RGS8P57771 180 aaPredicted RBP7.38□□□□□ -1.23
RIF1-201ENST00000243326 ILF2Q12905 390 aaKnown RBP7.38□□□□□ -1.23
RIF1-201ENST00000243326 GRB14Q14449 540 aa7.38□□□□□ -1.23
RIF1-201ENST00000243326 CCDC58Q4VC31 144 aa7.38□□□□□ -1.23
RIF1-201ENST00000243326 C9orf64Q5T6V5 341 aa7.38□□□□□ -1.23
RIF1-201ENST00000243326 LGI4Q8N135 537 aa7.38□□□□□ -1.23
RIF1-201ENST00000243326 FBXO9Q9UK97 447 aaPredicted RBP7.38□□□□□ -1.23
RIF1-201ENST00000243326 GRIP1Q9Y3R0 1128 aa7.38□□□□□ -1.23
RIF1-201ENST00000243326 PCNX2A6NKB5 2137 aa7.38□□□□□ -1.23
RIF1-201ENST00000243326 ARVCFO00192 962 aa7.38□□□□□ -1.23
RIF1-201ENST00000243326 EIF1AYO14602 144 aaKnown RBP7.38□□□□□ -1.23
RIF1-201ENST00000243326 GUCA1AP43080 201 aaPredicted RBP7.38□□□□□ -1.23
RIF1-201ENST00000243326 CHIT1Q13231 466 aa7.38□□□□□ -1.23
RIF1-201ENST00000243326 C18orf21Q32NC0 220 aaPredicted RBP7.38□□□□□ -1.23
RIF1-201ENST00000243326 ZBTB2Q8N680 514 aa7.38□□□□□ -1.23
RIF1-201ENST00000243326 DUSP16Q9BY84 665 aa7.38□□□□□ -1.23
RIF1-201ENST00000243326 MROH1Q8NDA8 1641 aa7.38□□□□□ -1.23
RIF1-201ENST00000243326 ROBO1Q9Y6N7 1651 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms