RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 TRAV20A0A0B4J274 112 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 ADAMDEC1O15204 470 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 C1QBP02746 253 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 RPS17P08708 135 aaKnown RBP12.65□□□□□ -0.38
VAMP4-201ENST00000236192 UGT2B10P36537 528 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 HTR3AP46098 478 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 CRKLP46109 303 aaKnown RBP12.65□□□□□ -0.38
VAMP4-201ENST00000236192 FTMTQ8N4E7 242 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 DPP10Q8N608 796 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 ZNF655Q8N720 491 aaPredicted RBP12.65□□□□□ -0.38
VAMP4-201ENST00000236192 TTLL6Q8N841 843 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 ZMYM5Q9UJ78 669 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 MAFFQ9ULX9 164 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 A0A1W2PQ67 120 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 WASHC1A8K0Z3 465 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 SLC28A1O00337 649 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 TOR1AO14656 332 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 MUSKO15146 869 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 LYRM1O43325 122 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 JUPP14923 745 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 AGXTP21549 392 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 HTR2AP28223 471 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 PLD1Q13393 1074 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 TMEM132DQ14C87 1099 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 ZACNQ401N2 412 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 BRMS1LQ5PSV4 323 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 PRSS42Q7Z5A4 293 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 STOML3Q8TAV4 291 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 DOK1Q99704 481 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 TTLL8A6PVC2 850 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 TMX2-CTNND1H3BSU7 103 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 ACOT8O14734 319 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 KRCC1Q9NPI7 259 aaPredicted RBP12.65□□□□□ -0.38
VAMP4-201ENST00000236192 A3GALT2U3KPV4 340 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 MYH7P12883 1935 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 SLC19A2O60779 497 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 CCNDBP1O95273 360 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 RLN1P04808 185 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 FPR1P21462 350 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 CPN2P22792 545 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 DSG2Q14126 1118 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 PTRHD1Q6GMV3 140 aaKnown RBP12.65□□□□□ -0.38
VAMP4-201ENST00000236192 RTL4Q6ZR62 310 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 GDPD3Q7L5L3 318 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 STRADAQ7RTN6 431 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 TSPEARQ8WU66 669 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 TNFAIP8L1Q8WVP5 186 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 KIF12Q96FN5 646 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 ALG5Q9Y673 324 aa12.65□□□□□ -0.38
VAMP4-201ENST00000236192 A0A1B0GVM2 712 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 A0A1W2PQ09 198 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 ZNF169Q14929 603 aaPredicted RBP12.64□□□□□ -0.39
VAMP4-201ENST00000236192 ARHGAP15Q53QZ3 475 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 CERCAMQ5T4B2 595 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 METTL23Q86XA0 190 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 P2RY11Q96G91 374 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 MTMR10Q9NXD2 777 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 ZNF219Q9P2Y4 722 aaPredicted RBP12.64□□□□□ -0.39
VAMP4-201ENST00000236192 ZNF69Q9UC07 566 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 TCAF2A6NFQ2 919 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 PDCD5O14737 125 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 RAD17O75943 681 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 RYKP34925 604 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 IDNKQ5T6J7 187 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 BEND5Q7L4P6 421 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 RAB11FIP2Q7L804 512 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 GPSM1Q86YR5 675 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 CYP2W1Q8TAV3 490 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 MEAF6Q9HAF1 191 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 JPH1Q9HDC5 661 aaPredicted RBP12.64□□□□□ -0.39
VAMP4-201ENST00000236192 KCNQ5Q9NR82 932 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 PLSCR3Q9NRY6 295 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 VWA7Q9Y334 891 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 RPL36Q9Y3U8 105 aaKnown RBP12.64□□□□□ -0.39
VAMP4-201ENST00000236192 TLL1O43897 1013 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 CCNB2O95067 398 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 FCER2P06734 321 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 ARNTP27540 789 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 HLA-FP30511 346 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 CDKN2CP42773 168 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 PPP1R8Q12972 351 aaKnown RBP12.64□□□□□ -0.39
VAMP4-201ENST00000236192 PAN3Q58A45 887 aaKnown RBP12.64□□□□□ -0.39
VAMP4-201ENST00000236192 MRPL48Q96GC5 212 aaKnown RBP12.64□□□□□ -0.39
VAMP4-201ENST00000236192 TMEM74Q96NL1 305 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 KCNC2Q96PR1 638 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 TMEM209Q96SK2 561 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 TSPAN16Q9UKR8 245 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 ANKDD1BA6NHY2 528 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 RFXANKO14593 260 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 HDCP19113 662 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 GALK2Q01415 458 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 MC2RQ01718 297 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 NRG1Q02297 640 aaPredicted RBP12.64□□□□□ -0.39
VAMP4-201ENST00000236192 FGL1Q08830 312 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 ADPRMQ3LIE5 342 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 OR4A15Q8NGL6 344 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 MAPK15Q8TD08 544 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 HSD17B14Q9BPX1 270 aa12.64□□□□□ -0.39
VAMP4-201ENST00000236192 NUSAP1Q9BXS6 441 aaKnown RBP12.64□□□□□ -0.39
VAMP4-201ENST00000236192 FTHL17Q9BXU8 183 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms