RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 TRAM2Q15035 370 aa8.21□□□□□ -1.1
SPARC-201ENST00000231061 ZIK1Q3SY52 487 aaPredicted RBP8.21□□□□□ -1.1
SPARC-201ENST00000231061 PTPN20Q4JDL3 420 aa8.21□□□□□ -1.1
SPARC-201ENST00000231061 PAN3Q58A45 887 aaKnown RBP8.21□□□□□ -1.1
SPARC-201ENST00000231061 PERM1Q5SV97 790 aa8.21□□□□□ -1.1
SPARC-201ENST00000231061 ATG16L1Q676U5 607 aa8.21□□□□□ -1.1
SPARC-201ENST00000231061 NANOGP8Q6NSW7 305 aa8.21□□□□□ -1.1
SPARC-201ENST00000231061 SPESP1Q6UW49 350 aa8.21□□□□□ -1.1
SPARC-201ENST00000231061 GPR180Q86V85 440 aa8.21□□□□□ -1.1
SPARC-201ENST00000231061 CTAGE3PQ8IX95 158 aa8.21□□□□□ -1.1
SPARC-201ENST00000231061 FAM86B1Q8N7N1 296 aa8.21□□□□□ -1.1
SPARC-201ENST00000231061 SLC24A4Q8NFF2 622 aa8.21□□□□□ -1.1
SPARC-201ENST00000231061 OR6J1Q8NGC5 347 aa8.21□□□□□ -1.1
SPARC-201ENST00000231061 ZBED3Q96IU2 234 aaPredicted RBP8.21□□□□□ -1.1
SPARC-201ENST00000231061 MAP3K3Q99759 626 aa8.21□□□□□ -1.1
SPARC-201ENST00000231061 ZNF416Q9BWM5 594 aa8.21□□□□□ -1.1
SPARC-201ENST00000231061 WDR55Q9H6Y2 383 aaPredicted RBP8.21□□□□□ -1.1
SPARC-201ENST00000231061 SNX15Q9NRS6 342 aa8.21□□□□□ -1.1
SPARC-201ENST00000231061 C5AR2Q9P296 337 aa8.21□□□□□ -1.1
SPARC-201ENST00000231061 SARDHQ9UL12 918 aa8.21□□□□□ -1.1
SPARC-201ENST00000231061 CORO2BQ9UQ03 480 aa8.21□□□□□ -1.1
SPARC-201ENST00000231061 ACTL7AQ9Y615 435 aa8.21□□□□□ -1.1
SPARC-201ENST00000231061 TCRBV7S3A2A0A539 114 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 MEI4A8MW99 385 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 B2RBV5 119 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 M0QZ92 97 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 AURKAO14965 403 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 SLC31A2O15432 143 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 ZWINTO95229 277 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 PIGRP01833 764 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 PTPRAP18433 802 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 CYP2B6P20813 491 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 EFNA1P20827 205 aaPredicted RBP8.2□□□□□ -1.1
SPARC-201ENST00000231061 WARSP23381 471 aaKnown RBP8.2□□□□□ -1.1
SPARC-201ENST00000231061 CDH8P55286 799 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 RPA4Q13156 261 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 EFHC2Q5JST6 749 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 DENND5AQ6IQ26 1287 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 FBXO42Q6P3S6 717 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 DARS2Q6PI48 645 aaKnown RBP8.2□□□□□ -1.1
SPARC-201ENST00000231061 SCIMPQ6UWF3 145 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 C10orf82Q8WW14 230 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 TCEAL3Q969E4 200 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 UTP4Q969X6 686 aaKnown RBP8.2□□□□□ -1.1
SPARC-201ENST00000231061 TMEM246Q9BRR3 403 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 PCED1AQ9H1Q7 454 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 LRMDAQ9H2I8 198 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 RNPEPQ9H4A4 650 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 ASCL3Q9NQ33 180 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 SLC17A7Q9P2U7 560 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 MORF4L1Q9UBU8 362 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 BOLA1Q9Y3E2 137 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 J3QRK9 145 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 OGTO15294 1046 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 SEC14L5O43304 696 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 LPXNO60711 386 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 LRCH4O75427 683 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 UBA1P22314 1058 aaKnown RBP8.2□□□□□ -1.1
SPARC-201ENST00000231061 IL1R2P27930 398 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 PTPN6P29350 595 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 EIF2S3P41091 472 aaKnown RBP8.2□□□□□ -1.1
SPARC-201ENST00000231061 TPMTP51580 245 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 TAS2R60P59551 318 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 CDO1Q16878 200 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 SLC9B1Q4ZJI4 515 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 HIKESHIQ53FT3 197 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 PRAMEF20Q5VT98 475 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 TIGD7Q6NT04 549 aaPredicted RBP8.2□□□□□ -1.1
SPARC-201ENST00000231061 ETV3LQ6ZN32 361 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 REPS2Q8NFH8 660 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 ZFP28Q8NHY6 868 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 SLC35B2Q8TB61 432 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 FBXL8Q96CD0 374 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 BSCL2Q96G97 398 aaPredicted RBP8.2□□□□□ -1.1
SPARC-201ENST00000231061 ZFP14Q9HCL3 533 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 C3orf18Q9UK00 162 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 CNTN6Q9UQ52 1028 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 OR6C75A6NL08 312 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 SLC22A1O15245 554 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 TYROBPO43914 113 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 ENTPD5O75356 428 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 TMEM63AO94886 807 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 HMGCRP04035 888 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 PTX3P26022 381 aaPredicted RBP8.2□□□□□ -1.1
SPARC-201ENST00000231061 GMPSP49915 693 aaPredicted RBP8.2□□□□□ -1.1
SPARC-201ENST00000231061 XKR4Q5GH76 650 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 RNF219Q5W0B1 726 aaPredicted RBP8.2□□□□□ -1.1
SPARC-201ENST00000231061 C6orf15Q6UXA7 325 aaPredicted RBP8.2□□□□□ -1.1
SPARC-201ENST00000231061 NPNTQ6UXI9 565 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 NET1Q7Z628 596 aaPredicted RBP8.2□□□□□ -1.1
SPARC-201ENST00000231061 TMEM130Q8N3G9 435 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 WDTC1Q8N5D0 677 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 OR9A2Q8NGT5 310 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 TTC9Q92623 222 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 RRNAD1Q96FB5 475 aaKnown RBP8.2□□□□□ -1.1
SPARC-201ENST00000231061 MAGEB10Q96LZ2 347 aaPredicted RBP8.2□□□□□ -1.1
SPARC-201ENST00000231061 GAL3ST4Q96RP7 486 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 CCNL2Q96S94 520 aaPredicted RBP8.2□□□□□ -1.1
SPARC-201ENST00000231061 NMUR1Q9HB89 426 aa8.2□□□□□ -1.1
SPARC-201ENST00000231061 TP53BP1Q12888 1972 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms