RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 R3HCC1LQ7Z5L2 792 aaKnown RBP20.16■□□□□ 0.82
SNX3-201ENST00000230085 HOMEZQ8IX15 550 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 FBXO39Q8N4B4 442 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 SCAIQ8N9R8 606 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 OR6P1Q8NGX9 317 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 ARRDC2Q8TBH0 407 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 NECTIN3Q9NQS3 549 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 GIMAP2Q9UG22 337 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 PDE10AQ9Y233 779 aa20.16■□□□□ 0.82
SNX3-201ENST00000230085 TMEM247A6NEH6 219 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 H3BMM5 538 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 J3QRK9 145 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 SLC22A1O15245 554 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 SNX2O60749 519 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 CNOT3O75175 753 aaKnown RBP20.15■□□□□ 0.82
SNX3-201ENST00000230085 CKMP06732 381 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 BMP1P13497 986 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 PCMT1P22061 227 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 YAP1P46937 504 aaKnown RBP20.15■□□□□ 0.82
SNX3-201ENST00000230085 STC1P52823 247 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 OR4D2P58180 307 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 CTF1Q16619 201 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 GEN1Q17RS7 908 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 SMU1Q2TAY7 513 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 RFX4Q33E94 735 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 FAM78AQ5JUQ0 283 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 C10orf120Q5SQS8 335 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 MARC1Q5VT66 337 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 MSANTD2Q6P1R3 559 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 PROKR1Q8TCW9 393 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 FBXL8Q96CD0 374 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 TEX37Q96LM6 180 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 RNF145Q96MT1 663 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 ASB16Q96NS5 453 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 NSUN5Q96P11 429 aaKnown RBP20.15■□□□□ 0.82
SNX3-201ENST00000230085 SLX1AQ9BQ83 275 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 SIK2Q9H0K1 926 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 ANKHQ9HCJ1 492 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 TMEM248Q9NWD8 314 aa20.15■□□□□ 0.82
SNX3-201ENST00000230085 TRNAU1APQ9NX07 287 aaKnown RBP20.15■□□□□ 0.82
SNX3-201ENST00000230085 TRAV19A0A0A6YYK7 116 aa20.14■□□□□ 0.81
SNX3-201ENST00000230085 SLC16A6O15403 523 aa20.14■□□□□ 0.81
SNX3-201ENST00000230085 OLFM2O95897 454 aa20.14■□□□□ 0.81
SNX3-201ENST00000230085 NCK1P16333 377 aa20.14■□□□□ 0.81
SNX3-201ENST00000230085 EEF1B2P24534 225 aaKnown RBP20.14■□□□□ 0.81
SNX3-201ENST00000230085 EEF1DP29692 281 aaKnown RBP20.14■□□□□ 0.81
SNX3-201ENST00000230085 IDUAP35475 653 aa20.14■□□□□ 0.81
SNX3-201ENST00000230085 ATP5C1P36542 298 aaKnown RBP20.14■□□□□ 0.81
SNX3-201ENST00000230085 OPRL1P41146 370 aa20.14■□□□□ 0.81
SNX3-201ENST00000230085 ZXDBP98169 803 aa20.14■□□□□ 0.81
SNX3-201ENST00000230085 GNA12Q03113 381 aa20.14■□□□□ 0.81
SNX3-201ENST00000230085 CHRNB3Q05901 458 aa20.14■□□□□ 0.81
SNX3-201ENST00000230085 AQP6Q13520 282 aa20.14■□□□□ 0.81
SNX3-201ENST00000230085 ZDHHC13Q8IUH4 622 aa20.14■□□□□ 0.81
SNX3-201ENST00000230085 DTWD1Q8N5C7 304 aa20.14■□□□□ 0.81
SNX3-201ENST00000230085 VPS33AQ96AX1 596 aa20.14■□□□□ 0.81
SNX3-201ENST00000230085 TBC1D20Q96BZ9 403 aa20.14■□□□□ 0.81
SNX3-201ENST00000230085 KCNA7Q96RP8 456 aa20.14■□□□□ 0.81
SNX3-201ENST00000230085 ZNF382Q96SR6 550 aa20.14■□□□□ 0.81
SNX3-201ENST00000230085 RBM4BQ9BQ04 359 aaKnown RBP20.14■□□□□ 0.81
SNX3-201ENST00000230085 RBM4Q9BWF3 364 aaKnown RBP20.14■□□□□ 0.81
SNX3-201ENST00000230085 FUNDC2Q9BWH2 189 aa20.14■□□□□ 0.81
SNX3-201ENST00000230085 NACA2Q9H009 215 aa20.14■□□□□ 0.81
SNX3-201ENST00000230085 SCHIP1Q9P0W5 487 aaPredicted RBP20.14■□□□□ 0.81
SNX3-201ENST00000230085 PCTPQ9UKL6 214 aa20.14■□□□□ 0.81
SNX3-201ENST00000230085 DOLKQ9UPQ8 538 aa20.14■□□□□ 0.81
SNX3-201ENST00000230085 CCL26Q9Y258 94 aa20.14■□□□□ 0.81
SNX3-201ENST00000230085 IGLV3-10A0A075B6K4 115 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 C1orf232A0A0U1RR37 186 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 KRBA1A5PL33 1030 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 RSL1D1O76021 490 aaKnown RBP20.13■□□□□ 0.81
SNX3-201ENST00000230085 PRAMEF12O95522 483 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 CD86P42081 329 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 UFM1P61960 85 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 ATP1A4Q13733 1029 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 PCSK7Q16549 785 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 CYP2A13Q16696 494 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 ALG1LQ6GMV1 187 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 CRTC3Q6UUV7 619 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 CHST15Q7LFX5 561 aaPredicted RBP20.13■□□□□ 0.81
SNX3-201ENST00000230085 BPIFB6Q8NFQ5 453 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 SH3RF2Q8TEC5 729 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 TAMM41Q96BW9 452 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 MBOAT4Q96T53 435 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 TOR3AQ9H497 397 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 SOX17Q9H6I2 414 aaPredicted RBP20.13■□□□□ 0.81
SNX3-201ENST00000230085 MAGIXQ9H6Y5 334 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 INTS7Q9NVH2 962 aaKnown RBP20.13■□□□□ 0.81
SNX3-201ENST00000230085 ZMYM5Q9UJ78 669 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 PCDHGA8Q9Y5G5 932 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 HS3ST4Q9Y661 456 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 ZFP37Q9Y6Q3 630 aaPredicted RBP20.13■□□□□ 0.81
SNX3-201ENST00000230085 MYO10Q9HD67 2058 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 CES1P23141 567 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 VIPR2P41587 438 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 EFEMP1Q12805 493 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 ITGADQ13349 1161 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 PWP1Q13610 501 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 IHHQ14623 411 aa20.13■□□□□ 0.81
SNX3-201ENST00000230085 C6orf136Q5SQH8 315 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms