RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 USE1Q9NZ43 259 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 ITGB1BP2Q9UKP3 347 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 BNIP3LO60238 219 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 CREG1O75629 220 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 UPK1BO75841 260 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 GABARAPO95166 117 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 UROSP10746 265 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 DNAJB1P25685 340 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 KRT20P35900 424 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 HK3P52790 923 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 OR2B6P58173 313 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 PPP2R2BQ00005 443 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 MED22Q15528 200 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 SF1Q15637 639 aaKnown RBP14.06□□□□□ -0.16
SFXN3-201ENST00000224807 CCDC85BQ15834 202 aaPredicted RBP14.06□□□□□ -0.16
SFXN3-201ENST00000224807 KDELC1Q6UW63 502 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 ZFAND4Q86XD8 727 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 DYNC2LI1Q8TCX1 351 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 SMARCD1Q96GM5 515 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 IPPKQ9H8X2 491 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 SLC52A3Q9NQ40 469 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 KRT84Q9NSB2 600 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 ZNF221Q9UK13 617 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 IFT52Q9Y366 437 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 SBF1O95248 1867 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 SLC7A4O43246 635 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 NUAK1O60285 661 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 OPN1SWP03999 348 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 FHP07954 510 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 FDXRP22570 491 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 WEE1P30291 646 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 OR1E1P30953 314 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 EIF2DP41214 584 aaKnown RBP14.06□□□□□ -0.16
SFXN3-201ENST00000224807 PNPLA4P41247 253 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 ZFP36L2P47974 494 aaKnown RBP14.06□□□□□ -0.16
SFXN3-201ENST00000224807 NKX3-2P78367 333 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 TIAL1Q01085 375 aaKnown RBP eCLIP14.06□□□□□ -0.16
SFXN3-201ENST00000224807 SMARCB1Q12824 385 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 ZFP69Q49AA0 526 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 TIGD5Q53EQ6 642 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 PSAPL1Q6NUJ1 521 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 PTRH1Q86Y79 214 aaKnown RBP14.06□□□□□ -0.16
SFXN3-201ENST00000224807 CADM2Q8N3J6 435 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 OR6K2Q8NGY2 324 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 ZNF599Q96NL3 588 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 EMILIN2Q9BXX0 1053 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 SLIRPQ9GZT3 109 aaKnown RBP14.06□□□□□ -0.16
SFXN3-201ENST00000224807 MMP28Q9H239 520 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 TIGARQ9NQ88 270 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 LATS2Q9NRM7 1088 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 SMPD4Q9NXE4 827 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 FKBPLQ9UIM3 349 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 OGDHLQ9ULD0 1010 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 N6AMT1Q9Y5N5 214 aa14.06□□□□□ -0.16
SFXN3-201ENST00000224807 LOC110117498-PIK3R3F6TDL0 507 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 TULP3O75386 442 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 SNRPD2P62316 118 aaKnown RBP14.05□□□□□ -0.16
SFXN3-201ENST00000224807 IRAK1BP1Q5VVH5 260 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 GDPD3Q7L5L3 318 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 GLT6D1Q7Z4J2 308 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 SPATA19Q7Z5L4 167 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 LRRTM3Q86VH5 581 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 PGBD5Q8N414 524 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 CDKN2AIPNLQ96HQ2 116 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 COPS4Q9BT78 406 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 ACTL8Q9H568 366 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 PCTPQ9UKL6 214 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 SPO11Q9Y5K1 396 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 IRAK2O43187 625 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 GLUD1P00367 558 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 DARSP14868 501 aaKnown RBP14.05□□□□□ -0.16
SFXN3-201ENST00000224807 ITIH1P19827 911 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 CD6P30203 668 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 CCL23P55773 120 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 SCAPQ12770 1279 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 BCL7AQ4VC05 210 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 ZNF691Q5VV52 312 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 PDE12Q6L8Q7 609 aaKnown RBP14.05□□□□□ -0.16
SFXN3-201ENST00000224807 DOK6Q6PKX4 331 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 LSRQ86X29 649 aaPredicted RBP14.05□□□□□ -0.16
SFXN3-201ENST00000224807 PARP16Q8N5Y8 322 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 CENPOQ9BU64 300 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 EBPLQ9BY08 206 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 MFSD1Q9H3U5 465 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 ACOT13Q9NPJ3 140 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 TSC2P49815 1807 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 USP34Q70CQ2 3546 aa14.05□□□□□ -0.16
SFXN3-201ENST00000224807 KERAO60938 352 aa14.04□□□□□ -0.16
SFXN3-201ENST00000224807 FGF4P08620 206 aa14.04□□□□□ -0.16
SFXN3-201ENST00000224807 GRK3P35626 688 aa14.04□□□□□ -0.16
SFXN3-201ENST00000224807 TWF1Q12792 350 aa14.04□□□□□ -0.16
SFXN3-201ENST00000224807 TIGD6Q17RP2 521 aa14.04□□□□□ -0.16
SFXN3-201ENST00000224807 CCDC58Q4VC31 144 aa14.04□□□□□ -0.16
SFXN3-201ENST00000224807 SPANXN2Q5MJ10 180 aa14.04□□□□□ -0.16
SFXN3-201ENST00000224807 PM20D1Q6GTS8 502 aa14.04□□□□□ -0.16
SFXN3-201ENST00000224807 TIGD7Q6NT04 549 aaPredicted RBP14.04□□□□□ -0.16
SFXN3-201ENST00000224807 NEK5Q6P3R8 708 aa14.04□□□□□ -0.16
SFXN3-201ENST00000224807 ZNF621Q6ZSS3 439 aa14.04□□□□□ -0.16
SFXN3-201ENST00000224807 SLC44A2Q8IWA5 706 aaPredicted RBP14.04□□□□□ -0.16
SFXN3-201ENST00000224807 LILRB4Q8NHJ6 448 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms