RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 PKD2L2Q9NZM6 624 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 OPTCQ9UBM4 332 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 TRIM64BA6NI03 449 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 H0Y858 1186 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 UPK1AO00322 258 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 ANKRD28O15084 1053 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 LSM1O15116 133 aaKnown RBP21.73■■□□□ 1.07
CCDC9-201ENST00000221922 TAPBPO15533 448 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 MT-ND1P03886 318 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 BMP1P13497 986 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 SOX11P35716 441 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 CTSOP43234 321 aaPredicted RBP21.73■■□□□ 1.07
CCDC9-201ENST00000221922 HLCSP50747 726 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 GALK1P51570 392 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 RAB39AQ14964 217 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 SMU1Q2TAY7 513 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 ZSWIM9Q86XI8 627 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 PNPT1Q8TCS8 783 aaKnown RBP21.73■■□□□ 1.07
CCDC9-201ENST00000221922 SP7Q8TDD2 431 aaPredicted RBP21.73■■□□□ 1.07
CCDC9-201ENST00000221922 ECHDC3Q96DC8 303 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 ASIC4Q96FT7 647 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 SCRN2Q96FV2 425 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 APOL5Q9BWW9 433 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 TLR9Q9NR96 1032 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 ELOVL2Q9NXB9 296 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 KCTD5Q9NXV2 234 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 PPIL1Q9Y3C6 166 aa21.73■■□□□ 1.07
CCDC9-201ENST00000221922 NPIPB15A6NHN6 443 aaPredicted RBP21.72■■□□□ 1.07
CCDC9-201ENST00000221922 HIDE1A8MVS5 230 aa21.72■■□□□ 1.07
CCDC9-201ENST00000221922 STT3AP46977 705 aa21.72■■□□□ 1.07
CCDC9-201ENST00000221922 STK19P49842 368 aaPredicted RBP21.72■■□□□ 1.07
CCDC9-201ENST00000221922 PPIGQ13427 754 aaKnown RBP eCLIP21.72■■□□□ 1.077e-7■□□□□ 11.2
CCDC9-201ENST00000221922 KLHL35Q6PF15 583 aa21.72■■□□□ 1.07
CCDC9-201ENST00000221922 CRTC1Q6UUV9 634 aa21.72■■□□□ 1.07
CCDC9-201ENST00000221922 DTWD1Q8N5C7 304 aa21.72■■□□□ 1.07
CCDC9-201ENST00000221922 CNDP2Q96KP4 475 aaKnown RBP21.72■■□□□ 1.07
CCDC9-201ENST00000221922 CEP44Q9C0F1 390 aa21.72■■□□□ 1.07
CCDC9-201ENST00000221922 ZDHHC3Q9NYG2 299 aa21.72■■□□□ 1.07
CCDC9-201ENST00000221922 PCDHGA11Q9Y5H2 935 aa21.72■■□□□ 1.07
CCDC9-201ENST00000221922 PLXNB3Q9ULL4 1909 aa21.72■■□□□ 1.07
CCDC9-201ENST00000221922 H3BMQ9 156 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 GRM6O15303 877 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 KATNA1O75449 491 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 WDR47O94967 919 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 G6PDP11413 515 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 MAD2L1Q13257 205 aaPredicted RBP21.71■■□□□ 1.07
CCDC9-201ENST00000221922 AP5B1Q2VPB7 878 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 ZDHHC20Q5W0Z9 365 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 CYP20A1Q6UW02 462 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 TSPAN33Q86UF1 283 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 RALGPS2Q86X27 583 aaPredicted RBP21.71■■□□□ 1.07
CCDC9-201ENST00000221922 EGFL6Q8IUX8 553 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 RHBDF1Q96CC6 855 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 COG8Q96MW5 612 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 CGREF1Q99674 301 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 TUBA1CQ9BQE3 449 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 CPEB1Q9BZB8 566 aaKnown RBP21.71■■□□□ 1.07
CCDC9-201ENST00000221922 SUV39H2Q9H5I1 410 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 PIF1Q9H611 641 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 SOX17Q9H6I2 414 aaPredicted RBP21.71■■□□□ 1.07
CCDC9-201ENST00000221922 POLR1BQ9H9Y6 1135 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 K7EPI3 171 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 RGS14O43566 566 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 MOSPD3O75425 235 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 ATE1O95260 518 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 PIK3CGP48736 1102 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 PWP1Q13610 501 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 SELPLGQ14242 412 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 PLPP4Q5VZY2 271 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 KCTD8Q6ZWB6 473 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 GALNT13Q8IUC8 556 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 TCEAL4Q96EI5 215 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 SLC25A13Q9UJS0 675 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 NEUROG3Q9Y4Z2 214 aa21.71■■□□□ 1.07
CCDC9-201ENST00000221922 SOBPA7XYQ1 873 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 EIF3FO00303 357 aaPredicted RBP21.7■■□□□ 1.06
CCDC9-201ENST00000221922 SLC28A1O00337 649 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 PFDN1O60925 122 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 DEAF1O75398 565 aaPredicted RBP21.7■■□□□ 1.06
CCDC9-201ENST00000221922 RAP2AP10114 183 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 PTPN2P17706 415 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 GGT1P19440 569 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 JAK1P23458 1154 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 ALDH3A2P51648 485 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 CBX2Q14781 532 aaPredicted RBP21.7■■□□□ 1.06
CCDC9-201ENST00000221922 ABRAXAS2Q15018 415 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 PHKG1Q16816 387 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 ARHGAP15Q53QZ3 475 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 CDKL4Q5MAI5 379 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 LRRC66Q68CR7 880 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 TTC23LQ6PF05 361 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 TMEM25Q86YD3 366 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 AADATQ8N5Z0 425 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 ZNF557Q8N988 423 aaPredicted RBP21.7■■□□□ 1.06
CCDC9-201ENST00000221922 GPR26Q8NDV2 337 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 OR8J3Q8NGG0 315 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 FNDC8Q8TC99 324 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 ULK4Q96C45 1275 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 PPM1MQ96MI6 270 aa21.7■■□□□ 1.06
CCDC9-201ENST00000221922 MCCC1Q96RQ3 725 aaPredicted RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms