RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 MAT2AP31153 395 aaKnown RBP19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 HNMTP50135 292 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 SLC25A3Q00325 362 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 CDYL2Q8N8U2 506 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 OR2L2Q8NH16 312 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 RSRC1Q96IZ7 334 aaKnown RBP19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 MARK4Q96L34 752 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 BTRCQ9Y297 605 aa19.21■□□□□ 0.67
TNFRSF1A-201ENST00000162749 TCRBV21S2A2A0A5A6 115 aa19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 PABPN1LA6NDY0 278 aaKnown RBP19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 OTCP00480 354 aa19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 ACADMP11310 421 aa19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 ARL1P40616 181 aaPredicted RBP19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 PPP2CBP62714 309 aa19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 PPP2CAP67775 309 aa19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 MXRA7P84157 204 aa19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 KLF10Q13118 480 aa19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 PLA2G4EQ3MJ16 856 aa19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 KIAA1324Q6UXG2 1013 aaKnown RBP19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 Q6ZS52 159 aa19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 CHSY3Q70JA7 882 aa19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 DDIASQ8IXT1 998 aa19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 TCAIMQ8N3R3 496 aa19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 OR4F6Q8NGB9 312 aa19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 N4BP2L2Q92802 583 aaPredicted RBP19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 NUSAP1Q9BXS6 441 aaKnown RBP19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 NCKAP1Q9Y2A7 1128 aa19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 A0A088AWK7 358 aa19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 NFE2L1Q14494 772 aa19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 MLF2Q15773 248 aaPredicted RBP19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 CPSF7Q8N684 471 aaKnown RBP19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 HM13Q8TCT9 377 aa19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 NRG4Q8WWG1 115 aa19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 ATP6V1E2Q96A05 226 aa19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 ANGPTL3Q9Y5C1 460 aa19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 COPG1Q9Y678 874 aaKnown RBP19.2■□□□□ 0.66
TNFRSF1A-201ENST00000162749 KNL1Q8NG31 2342 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 MGAT4DA6NG13 374 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 EPB42P16452 691 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 GABRG2P18507 467 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 GCKP35557 465 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 SLC6A12P48065 614 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 NEK5Q6P3R8 708 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 NET1Q7Z628 596 aaPredicted RBP19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 SLC32A1Q9H598 525 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 DUSP12Q9UNI6 340 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 USP34Q70CQ2 3546 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 KATNA1O75449 491 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 CAPN1P07384 714 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 LINC00032P0C843 101 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 CD1EP15812 388 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 MAP4P27816 1152 aaKnown RBP19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 ACSL1P33121 698 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 IGFALSP35858 605 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 MAPK9P45984 424 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 TPMTP51580 245 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 NAA25Q14CX7 972 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 TAF11Q15544 211 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 PTCHD3Q3KNS1 767 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 CCSMST1Q4G0I0 132 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 TCHHL1Q5QJ38 904 aaPredicted RBP19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 RIPOR1Q6ZS17 1223 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 PYCR2Q96C36 320 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 ANKRD27Q96NW4 1050 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 AKTIPQ9H8T0 292 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 FZD3Q9NPG1 666 aa19.19■□□□□ 0.66
TNFRSF1A-201ENST00000162749 LOC730098B7Z3J9 87 aa19.18■□□□□ 0.66
TNFRSF1A-201ENST00000162749 MAN2B1O00754 1011 aa19.18■□□□□ 0.66
TNFRSF1A-201ENST00000162749 CHEK2O96017 543 aa19.18■□□□□ 0.66
TNFRSF1A-201ENST00000162749 CATP04040 527 aaKnown RBP19.18■□□□□ 0.66
TNFRSF1A-201ENST00000162749 EPORP19235 508 aa19.18■□□□□ 0.66
TNFRSF1A-201ENST00000162749 SESN3P58005 492 aa19.18■□□□□ 0.66
TNFRSF1A-201ENST00000162749 TFF2Q03403 129 aa19.18■□□□□ 0.66
TNFRSF1A-201ENST00000162749 TTC23LQ6PF05 361 aa19.18■□□□□ 0.66
TNFRSF1A-201ENST00000162749 FAM83HQ6ZRV2 1179 aaPredicted RBP19.18■□□□□ 0.66
TNFRSF1A-201ENST00000162749 LRRC70Q7Z2Q7 622 aa19.18■□□□□ 0.66
TNFRSF1A-201ENST00000162749 LRRTM4Q86VH4 590 aa19.18■□□□□ 0.66
TNFRSF1A-201ENST00000162749 CMTM5Q96DZ9 223 aa19.18■□□□□ 0.66
TNFRSF1A-201ENST00000162749 FOPNLQ96NB1 174 aa19.18■□□□□ 0.66
TNFRSF1A-201ENST00000162749 NTMT1Q9BV86 223 aa19.18■□□□□ 0.66
TNFRSF1A-201ENST00000162749 C1QTNF7Q9BXJ2 289 aa19.18■□□□□ 0.66
TNFRSF1A-201ENST00000162749 DPEP2Q9H4A9 486 aa19.18■□□□□ 0.66
TNFRSF1A-201ENST00000162749 PHPT1Q9NRX4 125 aaPredicted RBP19.18■□□□□ 0.66
TNFRSF1A-201ENST00000162749 STX18Q9P2W9 335 aaKnown RBP19.18■□□□□ 0.66
TNFRSF1A-201ENST00000162749 STOML1Q9UBI4 398 aa19.18■□□□□ 0.66
TNFRSF1A-201ENST00000162749 POLG2Q9UHN1 485 aa19.18■□□□□ 0.66
TNFRSF1A-201ENST00000162749 LOC100653049A0A140TA62 436 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 UBDO15205 165 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 SLC22A2O15244 555 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 SLC31A1O15431 190 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 KRT34O76011 436 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 CHRNB1P11230 501 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 MYCLP1P12525 358 aaPredicted RBP19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 ADSLP30566 484 aaPredicted RBP19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 BDKRB1P46663 353 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 PIK3CGP48736 1102 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 ACTR3P61158 418 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 PLOD1Q02809 727 aaPredicted RBP19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 CDC16Q13042 620 aa19.17■□□□□ 0.66
TNFRSF1A-201ENST00000162749 XKR7Q5GH72 579 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms