RNA–Protein interactions for RNA: ENST00000075430.11

CTDP1-201, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CTDP1, Length 3,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-201ENST00000075430 DCP2Q8IU60 420 aaKnown RBP16.43■□□□□ 0.22
CTDP1-201ENST00000075430 ADHFE1Q8IWW8 467 aa16.43■□□□□ 0.22
CTDP1-201ENST00000075430 KIAA1191Q96A73 305 aa16.43■□□□□ 0.22
CTDP1-201ENST00000075430 EGLN2Q96KS0 407 aa16.43■□□□□ 0.22
CTDP1-201ENST00000075430 ZYG11BQ9C0D3 744 aa16.43■□□□□ 0.22
CTDP1-201ENST00000075430 POLR1EQ9GZS1 481 aaKnown RBP16.43■□□□□ 0.22
CTDP1-201ENST00000075430 ERVK13-1Q9NX77 482 aa16.43■□□□□ 0.22
CTDP1-201ENST00000075430 ABCG2Q9UNQ0 655 aa16.43■□□□□ 0.22
CTDP1-201ENST00000075430 NOX1Q9Y5S8 564 aa16.43■□□□□ 0.22
CTDP1-201ENST00000075430 PMF1-BGLAPU3KQ54 211 aa16.43■□□□□ 0.22
CTDP1-201ENST00000075430 PSME4Q14997 1843 aa16.43■□□□□ 0.22
CTDP1-201ENST00000075430 MIA3Q5JRA6 1907 aa16.43■□□□□ 0.22
CTDP1-201ENST00000075430 MATN4O95460 622 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 MMP2P08253 660 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 ODC1P11926 461 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 ARHGDIAP52565 204 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 MRPS6P82932 125 aaKnown RBP16.42■□□□□ 0.22
CTDP1-201ENST00000075430 MVKQ03426 396 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 GRSF1Q12849 480 aaKnown RBP eCLIP16.42■□□□□ 0.22
CTDP1-201ENST00000075430 RBM48Q5RL73 367 aaKnown RBP16.42■□□□□ 0.22
CTDP1-201ENST00000075430 LAIR1Q6GTX8 287 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 SPATA19Q7Z5L4 167 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 THEM5Q8N1Q8 247 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 PDPRQ8NCN5 879 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 ATL1Q8WXF7 558 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 TM6SF2Q9BZW4 377 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 GPN2Q9H9Y4 310 aaPredicted RBP16.42■□□□□ 0.22
CTDP1-201ENST00000075430 PARVBQ9HBI1 364 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 INTS6Q9UL03 887 aaKnown RBP16.42■□□□□ 0.22
CTDP1-201ENST00000075430 FGF10O15520 208 aaPredicted RBP16.42■□□□□ 0.22
CTDP1-201ENST00000075430 CREG1O75629 220 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 OPN1SWP03999 348 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 FGF4P08620 206 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 ATP4BP51164 291 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 ISL1P61371 349 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 RPS24P62847 133 aaKnown RBP16.42■□□□□ 0.22
CTDP1-201ENST00000075430 RACK1P63244 317 aaKnown RBP16.42■□□□□ 0.22
CTDP1-201ENST00000075430 UBE3AQ05086 875 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 ZFAND4Q86XD8 727 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 ARMC8Q8IUR7 673 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 SIX5Q8N196 739 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.42■□□□□ 0.22
CTDP1-201ENST00000075430 PTCD2Q8WV60 388 aaKnown RBP16.42■□□□□ 0.22
CTDP1-201ENST00000075430 CEP19Q96LK0 163 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 OSBPL10Q9BXB5 764 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 TRIM64CA6NLI5 447 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 CYP11A1P05108 521 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 POLD2P49005 469 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 KCNQ1P51787 676 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 AIF1P55008 147 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 COL9A2Q14055 689 aaPredicted RBP16.42■□□□□ 0.22
CTDP1-201ENST00000075430 LAIR2Q6ISS4 152 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 DOK6Q6PKX4 331 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 FAM151BQ6UXP7 276 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 NECAB2Q7Z6G3 386 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 B3GNT8Q7Z7M8 397 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 TTC29Q8NA56 475 aaPredicted RBP16.42■□□□□ 0.22
CTDP1-201ENST00000075430 NECTIN4Q96NY8 510 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 TUBA1CQ9BQE3 449 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 CEP44Q9C0F1 390 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 RNF38Q9H0F5 515 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 DSN1Q9H410 356 aa16.42■□□□□ 0.22
CTDP1-201ENST00000075430 AIREO43918 545 aa16.41■□□□□ 0.22
CTDP1-201ENST00000075430 KCNE1P15382 129 aa16.41■□□□□ 0.22
CTDP1-201ENST00000075430 GGT1P19440 569 aa16.41■□□□□ 0.22
CTDP1-201ENST00000075430 CD40LGP29965 261 aa16.41■□□□□ 0.22
CTDP1-201ENST00000075430 ALDH7A1P49419 539 aaKnown RBP16.41■□□□□ 0.22
CTDP1-201ENST00000075430 CARD16Q5EG05 197 aa16.41■□□□□ 0.22
CTDP1-201ENST00000075430 MS4A13Q5J8X5 152 aa16.41■□□□□ 0.22
CTDP1-201ENST00000075430 SPRYD7Q5W111 196 aa16.41■□□□□ 0.22
CTDP1-201ENST00000075430 THOC7Q6I9Y2 204 aaKnown RBP16.41■□□□□ 0.22
CTDP1-201ENST00000075430 GDF6Q6KF10 455 aaPredicted RBP16.41■□□□□ 0.22
CTDP1-201ENST00000075430 FAM193BQ96PV7 902 aaPredicted RBP16.41■□□□□ 0.22
CTDP1-201ENST00000075430 ZNF490Q9ULM2 529 aaPredicted RBP16.41■□□□□ 0.22
CTDP1-201ENST00000075430 PADI3Q9ULW8 664 aa16.41■□□□□ 0.22
CTDP1-201ENST00000075430 FAM92AA1XBS5 289 aa16.41■□□□□ 0.22
CTDP1-201ENST00000075430 ATXN1LP0C7T5 689 aaKnown RBP16.41■□□□□ 0.22
CTDP1-201ENST00000075430 PKMP14618 531 aaKnown RBP16.41■□□□□ 0.22
CTDP1-201ENST00000075430 PDE12Q6L8Q7 609 aaKnown RBP16.41■□□□□ 0.22
CTDP1-201ENST00000075430 TFB2MQ9H5Q4 396 aaKnown RBP16.41■□□□□ 0.22
CTDP1-201ENST00000075430 RGS10O43665 173 aa16.41■□□□□ 0.22
CTDP1-201ENST00000075430 S100A5P33763 92 aa16.41■□□□□ 0.22
CTDP1-201ENST00000075430 CCL23P55773 120 aa16.41■□□□□ 0.22
CTDP1-201ENST00000075430 ILF2Q12905 390 aaKnown RBP16.41■□□□□ 0.22
CTDP1-201ENST00000075430 STEAP3Q658P3 488 aa16.41■□□□□ 0.22
CTDP1-201ENST00000075430 RIMKLAQ8IXN7 391 aa16.41■□□□□ 0.22
CTDP1-201ENST00000075430 GTF3C2Q8WUA4 911 aaPredicted RBP16.41■□□□□ 0.22
CTDP1-201ENST00000075430 MUL1Q969V5 352 aa16.41■□□□□ 0.22
CTDP1-201ENST00000075430 RTP3Q9BQQ7 232 aa16.41■□□□□ 0.22
CTDP1-201ENST00000075430 ACTL8Q9H568 366 aa16.41■□□□□ 0.22
CTDP1-201ENST00000075430 EIF3LQ9Y262 564 aaKnown RBP16.41■□□□□ 0.22
CTDP1-201ENST00000075430 AP3D1O14617 1153 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 PGRP06401 933 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 GOLGA7Q7Z5G4 137 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 ARRDC2Q8TBH0 407 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 SNX6Q9UNH7 406 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 TPRKBQ9Y3C4 175 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 PCDHGA10Q9Y5H3 936 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 ALPIP09923 528 aa16.4■□□□□ 0.22
CTDP1-201ENST00000075430 PWP1Q13610 501 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms