RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 SELENONQ9NZV5 590 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 OPTCQ9UBM4 332 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 PCDHB1Q9Y5F3 818 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 CORINQ9Y5Q5 1042 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 NEDD8-MDP1E9PL57 170 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 IGSF6O95976 241 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 FUT4P22083 530 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 HRH2P25021 359 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 PSMA3P25788 255 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 ZNF648Q5T619 568 aaPredicted RBP12.86□□□□□ -0.35
CTNS-201ENST00000046640 GALNT18Q6P9A2 607 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 ZNF783Q6ZMS7 281 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 CHST14Q8NCH0 376 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 OR2AP1Q8NGE2 309 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 FIG4Q92562 907 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 ULK4Q96C45 1275 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 UTS2RQ9UKP6 389 aa12.86□□□□□ -0.35
CTNS-201ENST00000046640 NUP214P35658 2090 aaPredicted RBP12.85□□□□□ -0.35
CTNS-201ENST00000046640 GBF1Q92538 1859 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 UPK3BL1B0FP48 263 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 UPK3BL2E5RIL1 263 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 LEFTY2O00292 366 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 SEC22BO75396 215 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 EEDO75530 441 aaKnown RBP12.85□□□□□ -0.35
CTNS-201ENST00000046640 B3GALT4O96024 378 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 OTCP00480 354 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 OCM2P0CE71 109 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 OCMP0CE72 109 aaPredicted RBP12.85□□□□□ -0.35
CTNS-201ENST00000046640 SRCP12931 536 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 LHCGRP22888 699 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 DGKAP23743 735 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 SERPINA4P29622 427 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 CCR2P41597 374 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 BMXP51813 675 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 BOP1Q14137 746 aaKnown RBP12.85□□□□□ -0.35
CTNS-201ENST00000046640 CDKN3Q16667 212 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 ASTLQ6HA08 431 aaPredicted RBP12.85□□□□□ -0.35
CTNS-201ENST00000046640 CNKSR3Q6P9H4 555 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 Q6ZNX1 250 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 DPY19L3Q6ZPD9 716 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 Q6ZVU0 165 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 SPRED1Q7Z699 444 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 SNX29P2Q8IUI4 249 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 DDHD1Q8NEL9 900 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 TANKQ92844 425 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 GFM2Q969S9 779 aaKnown RBP12.85□□□□□ -0.35
CTNS-201ENST00000046640 TCEAL4Q96EI5 215 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 CEP295NLQ96MC4 621 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 BRINP2Q9C0B6 783 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 CCDC90BQ9GZT6 254 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 PAK6Q9NQU5 681 aaPredicted RBP12.85□□□□□ -0.35
CTNS-201ENST00000046640 PTBP2Q9UKA9 531 aaKnown RBP12.85□□□□□ -0.35
CTNS-201ENST00000046640 ZNF490Q9ULM2 529 aaPredicted RBP12.85□□□□□ -0.35
CTNS-201ENST00000046640 TCRBV5S2A0A599 114 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 FAM234BA2RU67 622 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 PTGES3LE9PB15 166 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 DFNA5O60443 496 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 C8AP07357 584 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 SPAM1P38567 509 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 PCBP2Q15366 365 aaKnown RBP eCLIP12.85□□□□□ -0.35
CTNS-201ENST00000046640 FAM174BQ3ZCQ3 159 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 C1QTNF12Q5T7M4 302 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 GRAMD4Q6IC98 578 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 ANKRD26P1Q6NSI1 321 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 CROCCP3Q8IVE0 287 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 NXPE1Q8N323 547 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 RNF175Q8N4F7 328 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 SLC15A4Q8N697 577 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 PACRGLQ8N7B6 248 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 FAM86B1Q8N7N1 296 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 SCAMP4Q969E2 229 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 TMBIM1Q969X1 311 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 NSMCE2Q96MF7 247 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 TRIM54Q9BYV2 358 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 PFDN4Q9NQP4 134 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 ARL15Q9NXU5 204 aa12.85□□□□□ -0.35
CTNS-201ENST00000046640 KIAA1522Q9P206 1035 aaPredicted RBP12.85□□□□□ -0.35
CTNS-201ENST00000046640 TNPO3Q9Y5L0 923 aaKnown RBP12.85□□□□□ -0.35
CTNS-201ENST00000046640 KANSL1LA0AUZ9 987 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 K7EPI3 171 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 TOR1BO14657 336 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 GNRH1P01148 92 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 GPIP06744 558 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 PRKACGP22612 351 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 PPP3CCP48454 512 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 PHEXP78562 749 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 PTSQ03393 145 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 ILF2Q12905 390 aaKnown RBP12.84□□□□□ -0.35
CTNS-201ENST00000046640 NR1D2Q14995 579 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 GPRC6AQ5T6X5 926 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 EFL1Q7Z2Z2 1120 aaKnown RBP12.84□□□□□ -0.35
CTNS-201ENST00000046640 ZFAND4Q86XD8 727 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 BEND7Q8N7W2 519 aaPredicted RBP12.84□□□□□ -0.35
CTNS-201ENST00000046640 ZNF366Q8N895 744 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 ACDQ96AP0 544 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 RHBDF1Q96CC6 855 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 THUMPD3Q9BV44 507 aaKnown RBP12.84□□□□□ -0.35
CTNS-201ENST00000046640 LINC00597Q9H2U6 94 aa12.84□□□□□ -0.35
CTNS-201ENST00000046640 TUBA8Q9NY65 449 aaPredicted RBP12.84□□□□□ -0.35
CTNS-201ENST00000046640 VAPAQ9P0L0 249 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms