RNA–Protein interactions for RNA: ENSMUST00000082209.12

Scn8a-201, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS ALT1 TSL 5 BASIC

Gene Scn8a, Length 11,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-201ENSMUST00000082209 TroapB7ZNG4 668 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Ckmt1P30275 418 aaKnown RBP10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Cyp2f2P33267 491 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Jak1P52332 1153 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 ArvcfP98203 962 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Creb3l2Q8BH52 521 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Echs1Q8BH95 290 aaKnown RBP10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Grhl1Q921D9 618 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 SncaipQ99ME3 962 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 SelenosQ9BCZ4 190 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Pih1d1Q9CQJ2 290 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Vsig1Q9D2J4 407 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Q9D2Q3 444 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 AU018091E9PWS4 684 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Mmp10O55123 476 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Mfsd3Q5U419 412 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Laptm5Q61168 261 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Scgb1c1Q7M742 95 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Coq9Q8K1Z0 313 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 P2yr13Q9D8I2 337 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Hnf4aP49698 474 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Htr4P97288 388 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Adamts16Q69Z28 1222 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Pum1Q80U78 1189 aaKnown RBP10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Zcchc4Q8BKW4 512 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Mterf3Q8R3J4 412 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Mrgpra1Q91WW5 304 aa10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Zfc3h1B2RT41 1992 aaKnown RBP10.29□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Xkr4Q5GH67 647 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Chrnb3Q8BMN3 464 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Slc15a3Q8BPX9 578 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Olfr342Q8VGK7 312 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 5330417H12RikQ9D3P2 110 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Fabp12Q9DAK4 132 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Actl10A2AKE7 346 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Scamp3O35609 349 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Tmem165P52875 323 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 SmsP97355 366 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Gm45902Q3UDN3 361 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Spata48Q5NC83 441 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Sytl5Q80T23 753 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Sppl3Q9CUS9 384 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Gm2035J3QP87 144 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Csf2P01587 141 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Ccdc69Q3TCJ8 202 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Cyp4f37Q3V1F1 546 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Fam221bQ8C627 487 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Dnm1lQ8K1M6 742 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Pofut2Q8VHI3 429 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Trbv4A0A075B5I2 113 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Rasgef1aA0A0N4SVR5 498 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 TomtA1Y9I9 258 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Vmn2r18E9Q280 788 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Pdx1P52946 284 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Ogfrl1Q8VE52 464 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Serpinb11Q9CQV3 388 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Pbdc1Q9D0B6 198 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Lrp6O88572 1613 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Coro1aO89053 461 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 HecaQ3V1N5 544 aaKnown RBP10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 H2-Q2Q4KN81 360 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 GatcQ8CBY0 155 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Rfwd3Q8CIK8 774 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 St7lQ8K4P7 559 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Olfr1346Q8VGH6 313 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Zfp600A2A7V0 737 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Kcna10B2RQA1 511 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Aqp8P56404 261 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Gpat2Q14DK4 801 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Fam198bQ3UPI1 517 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Scarf1Q5ND28 820 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Psd2Q6P1I6 770 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Camk1Q91YS8 374 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Emc3Q99KI3 261 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 PglsQ9CQ60 257 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Serpinb7Q9D695 380 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Q9D979 236 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Cldn24D3YXJ9 220 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Cd68P31996 326 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 FcamrQ2TB54 535 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Smad3Q8BUN5 425 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 MaelQ8BVN9 434 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Sh3d19Q91X43 789 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Nudt17Q9CWD3 296 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Rnf181Q9CY62 165 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 4930402K13RikB1AW18 415 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Gm16434J3QN10 205 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 4930555G01RikL7N253 205 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Tcea3P23881 347 aaKnown RBP10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Dsg4Q7TMD7 1041 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Fastkd5Q7TMV3 762 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 LaynQ8C351 381 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Rbms2Q8VC70 383 aaKnown RBP10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Nadk2Q8C5H8 452 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Rhbdl1Q8VC82 373 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Olfr385Q8VGT1 312 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Lysmd3Q99LE3 305 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Prl2b1Q9DAZ2 228 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Slc7a8Q9QXW9 531 aa10.28□□□□□ -0.76
Scn8a-201ENSMUST00000082209 Clk4O35493 481 aa10.27□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 49.2 ms