RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Olfr741L7N1Y5 311 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Nfatc2ipO09130 412 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Scg5P12961 212 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 CtsdP18242 410 aaKnown RBP11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Nedd8P29595 81 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Plin2P43883 425 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Lefty2P57785 368 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Myadml2Q08AU7 307 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Snx6Q6P8X1 406 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 TrhdeQ8K093 1025 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Vmn1r18Q8R2C8 299 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Ubox5Q925F4 539 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Smarcd2Q99JR8 531 aaKnown RBP11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Trim13Q9CYB0 407 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 NarfQ9CYQ7 462 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 CenpaO35216 134 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 NadkP58058 439 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Ythdf1P59326 559 aaKnown RBP11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gpr149Q3UVY1 732 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Ubxn7Q6P5G6 467 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Dhcr24Q8VCH6 516 aaKnown RBP11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Uts2rQ8VIH9 385 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Pus10Q9D3U0 527 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Usp12Q9D9M2 370 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 MecrQ9DCS3 373 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 ChmlQ9QZD5 621 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Lipo4D3Z608 396 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Prim2P33610 505 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Erp29P57759 262 aaKnown RBP11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Acot8P58137 320 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Btbd1P58544 488 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Hhla1Q3TYV2 514 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gm853Q3UNZ2 425 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Kcnh1Q60603 989 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 FukQ7TMC8 1090 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Got1l1Q7TSV6 404 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Slc29a4Q8R139 528 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Smyd2Q8R5A0 433 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Spns2Q91VM4 549 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Pgm3Q9CYR6 542 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Cpxm2Q9D2L5 764 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Tor1bQ9ER41 336 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Actl7bQ9QY83 418 aa11.66□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Eif2b3B1AUN2 452 aaKnown RBP11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gm4847G3X946 537 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Pim1P06803 397 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Tgfb3P17125 410 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Trappc9Q3U0M1 1148 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Npdc1Q64322 332 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 ParpbpQ6IRT3 573 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Olfr384Q7TRX8 312 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 B3gnt5Q8BGY6 376 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Cxcl16Q8BSU2 246 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Tmem72Q8C3K5 275 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Fam129bQ8R1F1 749 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Tmem159Q922Z1 161 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Cers2Q924Z4 380 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Atp5dQ9D3D9 168 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Rsph9Q9D9V4 276 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Myh9Q8VDD5 1960 aaKnown RBP11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gm33543A0A1B0GSI5 81 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gm5072A2AHM1 344 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Enthd1E9Q1Z2 618 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Vmn2r65G3X931 845 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Olfr319L7MTY4 306 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Kcnk1O08581 336 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Il6raP22272 460 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Vac14Q80WQ2 782 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Tbx10Q810F8 385 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Slc39a9Q8BFU1 308 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 LctlQ8K1F9 566 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Q91W34 466 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Golga7Q91W53 137 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 ScgnQ91WD9 276 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Haus8Q99L00 373 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Pdzd3Q99MJ6 498 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Txndc9Q9CQ79 226 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Prps2Q9CS42 318 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 UqcrbQ9D855 111 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Uba2Q9Z1F9 638 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Rpl7a-ps3A0A140T8L1 270 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Stxbp1O08599 594 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Epb41P48193 858 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Padi2Q08642 673 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Snx21Q3UR97 363 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 MyorgQ69ZQ1 716 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Klhl6Q6V595 619 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Fam131aQ8BWU3 361 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Gk5Q8BX05 534 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Fam46bQ8C152 427 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 SgshQ9EQ08 502 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Fut2Q9JL27 347 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Slco1a1Q9QXZ6 670 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Plxnb2B2RXS4 1842 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Itih4A6X935 942 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Inpp5aE9QAS7 422 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Serpinb9eO08806 377 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Slc32a1O35633 525 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 Pbx2O35984 430 aa11.65□□□□□ -0.54
Pcif1-201ENSMUST00000041643 HalP35492 657 aa11.65□□□□□ -0.54
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms