RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Klc2O88448 599 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Igfbp3P47878 292 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Kcnab2P62482 367 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Rps3P62908 243 aaKnown RBP11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 RogdiQ3TDK6 287 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 AtminQ6P9S1 818 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Olfr533Q7TRT7 320 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Vangl1Q80Z96 526 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Pramel7Q810Y8 479 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Hs3st5Q8BSL4 346 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Dpp9Q8BVG4 862 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 BpifcQ8C186 509 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Trpv3Q8K424 791 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Ces2aQ8QZR3 558 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 GneQ91WG8 722 aaKnown RBP11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Twf1Q91YR1 350 aaKnown RBP11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Ppil3Q9D6L8 161 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Actl7aQ9QY84 440 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Hs6st1Q9QYK5 411 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Gipc2Q9Z2H7 314 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Lzts3A2AHG0 700 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Fam166bA2AIP0 273 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 HgdO09173 445 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Gosr2O35166 212 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Rdh7O88451 316 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Scd1P13516 355 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Arhgap39P59281 1107 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Cdo1P60334 200 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Aup1P70295 410 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Slc38a5Q3U1J0 479 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Rcsd1Q3UZA1 412 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Bhlha9Q5RJB0 231 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 MertkQ60805 994 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Nptx1Q62443 432 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 KdsrQ6GV12 332 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Ldoc1Q7TPY9 151 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Zdhhc19Q810M5 347 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Castor2Q8CAB8 329 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Trnt1Q8K1J6 434 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Ints10Q8K2A7 710 aaKnown RBP11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Psat1Q99K85 370 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Kat8Q9D1P2 458 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Rpl4Q9D8E6 419 aaKnown RBP11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Fam3aQ9D8T0 230 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Q9DAD0 168 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 ChmlQ9QZD5 621 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Creb3l1Q9Z125 519 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Col11a1Q61245 1804 aa11.31□□□□□ -0.6
Sdc1-201ENSMUST00000020911 A0A286YDU1 74 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Dmrtb1A2A9I7 359 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Tmem245B1AZA5 876 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Gm10720D3Z1I5 223 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Gm5930D3Z257 264 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Zfp995E9Q6M3 437 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Gm8050L7N2E3 205 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Tnfrsf11bO08712 401 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Edil3O35474 480 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 FiglaO55208 194 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Cops3O88543 423 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Cops4O88544 406 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Gsx2P31316 305 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Psma2P49722 234 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Hrh3P58406 445 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Itga11P61622 1188 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 IhhP97812 411 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Mrpl10Q3TBW2 262 aaKnown RBP11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Ube2j2Q6P073 259 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Olfr1308Q7TQX0 320 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 CcnyQ8BGU5 341 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Fbxw14Q8C2Y5 466 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Q8CC96 669 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Appl1Q8K3H0 707 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Q922R1 422 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Q9CZV2 255 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Osbpl3Q9DBS9 855 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Znf207Q9JMD0 495 aaKnown RBP11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Tmem59Q9QY73 323 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Gm5538W4VSP6 401 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 SktA2AQ25 1946 aaKnown RBP11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Tnfrsf25B1AWN9 411 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Cbx4O55187 551 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Ctla2aP12399 137 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Capza2P47754 286 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Znf865Q3U3I9 1058 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 CrxosQ3UL53 246 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Ggt1Q60928 568 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 HiraQ61666 1015 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Syn2Q64332 586 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Slc25a23Q6GQS1 467 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Ckap4Q8BMK4 575 aaKnown RBP11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 IlvblQ8BU33 632 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Nt5dc1Q8C5P5 467 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Cox10Q8CFY5 443 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Txndc11Q8K2W3 948 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Rnf219Q8K2Y0 722 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Fndc5Q8K4Z2 209 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Vmn1r205Q8R276 316 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Kcnk7Q9Z2T1 307 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Slfn3A0A1L1STQ7 640 aa11.3□□□□□ -0.6
Sdc1-201ENSMUST00000020911 Gm21293E9Q4G9 266 aa11.3□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms