RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Ikzf5Q8BU00 419 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 BtdQ8CIF4 520 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Olfr1250Q8VGM3 314 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Lrrc40Q9CRC8 602 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Tmem135Q9CYV5 458 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Galk1Q9R0N0 392 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Vmn2r50E9PW61 861 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Slc28a1E9PXX9 648 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Vmn2r86G5E8Y4 848 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Vmn2r31L7N1Z4 861 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Anxa6P14824 673 aaKnown RBP15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Lhx3P50481 400 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Adamts19P59509 1210 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 IdsQ08890 552 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Brms1lQ3U1T3 323 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Naa11Q3UX61 218 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Zbtb2Q3V3W4 514 aaKnown RBP15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Olfr695Q8VFM3 315 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Olfr665Q8VG79 316 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Lims2Q91XD2 341 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Chid1Q922Q9 393 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Rgs18Q99PG4 235 aa15.92■□□□□ 0.14
Trim28-201ENSMUST00000005705 Igkv5-45A0A0B4J1J1 115 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 Mrgpra2aA0A0R4J1Z0 331 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 RerglB2RVE2 204 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 Vmn2r73D3Z7M3 851 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 Sod3O09164 251 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 P01669 111 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 Gja1P23242 382 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 Cntn5P68500 1098 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 Lingo4Q149C3 593 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 SynaQ5G5D5 617 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 Itga2Q62469 1178 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 Ddx51Q6P9R1 639 aaKnown RBP15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 Magee1Q6PCZ4 918 aaKnown RBP15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 Sirt3Q8R104 334 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 Atg10Q8R1P4 215 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 Abcb8Q9CXJ4 717 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 Hddc3Q9D114 179 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 Gpr63Q9EQQ3 425 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 DnpepQ9Z2W0 473 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 Cyp2j8G3UZ38 503 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 P01668 110 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 Cldn11Q60771 207 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 RhocQ62159 193 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 Olfr213Q7TS32 327 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 Ncs1Q8BNY6 190 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 Gstt3Q99L20 241 aa15.91■□□□□ 0.14
Trim28-201ENSMUST00000005705 Rpl3lE9PWZ3 407 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Olfr620E9PZ66 313 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Olfr237-ps1K9J725 310 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Nrp2O35375 931 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Angpt2O35608 496 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 DtlQ3TLR7 729 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Slc23a3Q60850 611 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Tead4Q62296 427 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Ip6k1Q6PD10 433 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 TxlngQ8BHN1 524 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Ago1Q8CJG1 857 aaKnown RBP15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Mrgpra2Q91WW4 305 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Atoh8Q99NA2 322 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Slc24a3Q99PD7 645 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Dph2Q9CR25 489 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 BlvraQ9CY64 295 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Gpc6Q9R087 555 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Oaz3Q9R109 243 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 PtprfA2A8L5 1898 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Il20rbE9Q9A6 308 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Gm6502L7N456 481 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Ptpn22P29352 802 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Akt1P31750 480 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Slc16a1P53986 493 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Nudt2P56380 147 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 E2f2P56931 443 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Kcnk2P97438 426 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Clca4bQ3UW98 925 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Fam149b1Q6NSV7 578 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Cars2Q8BYM8 551 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 SynpoQ8CC35 929 aaKnown RBP15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Ugt2b1Q8R084 529 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Olfr722Q8VFC8 308 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Klk6Q91Y82 253 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Ifitm3Q9CQW9 137 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Adad2Q9D5P4 478 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Kat6aQ8BZ21 2003 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 P01673 111 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 HmbsP22907 361 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Gna12P27600 379 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Stfa3P35173 103 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 AhcyP50247 432 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 LvrnQ2KHK3 559 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Ulk3Q3U3Q1 472 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Mxd4Q60948 209 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Lag3Q61790 521 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Lingo3Q6GQU6 589 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Zbtb24Q80X44 710 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Slc6a15Q8BG16 729 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Tbc1d10bQ8BHL3 798 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Cpne3Q8BT60 533 aa15.9■□□□□ 0.14
Trim28-201ENSMUST00000005705 Asb2Q8K0L0 634 aa15.9■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 20.7 ms