RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 ACTR3P61158 418 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 MXRA7P84157 204 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 FGL2Q14314 439 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 LPAL2Q16609 132 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 CDKN3Q16667 212 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 TRIM61Q5EBN2 209 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 LRRC73Q5JTD7 316 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 CTSL3PQ5NE16 218 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 C6orf163Q5TEZ5 329 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 LYPLAL1Q5VWZ2 237 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 PSAPL1Q6NUJ1 521 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 UGT3A1Q6NUS8 523 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 PAQR3Q6TCH7 311 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 TECPR1Q7Z6L1 1165 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 PELI3Q8N2H9 469 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 POU5F2Q8N7G0 328 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 PTGR2Q8N8N7 351 aaPredicted RBP10.07□□□□□ -0.8
PHGDH-224ENST00000641711 AGR3Q8TD06 166 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 WDR60Q8WVS4 1066 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.07□□□□□ -0.82e-7■■■■■ 68.5
PHGDH-224ENST00000641711 EID2BQ96D98 161 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 PDLIM5Q96HC4 596 aaKnown RBP10.07□□□□□ -0.8
PHGDH-224ENST00000641711 WRAP53Q9BUR4 548 aaKnown RBP10.07□□□□□ -0.8
PHGDH-224ENST00000641711 GPR63Q9BZJ6 419 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 MIR1-1HGQ9H1L0 117 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 ARRDC1-AS1Q9H2J1 176 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 ERVMER34-1Q9H9K5 563 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 ZBTB26Q9HCK0 441 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 AASDHPPTQ9NRN7 309 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 SEMA4GQ9NTN9 838 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 SLC7A8Q9UHI5 535 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 C15orf41Q9Y2V0 281 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 TRAF6Q9Y4K3 522 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.07□□□□□ -0.8
PHGDH-224ENST00000641711 GOLGA4Q13439 2230 aaKnown RBP10.07□□□□□ -0.8
PHGDH-224ENST00000641711 ASCC3Q8N3C0 2202 aaKnown RBP10.07□□□□□ -0.8
PHGDH-224ENST00000641711 LRP4O75096 1905 aa10.07□□□□□ -0.8
PHGDH-224ENST00000641711 CNOT1A5YKK6 2376 aaKnown RBP10.06□□□□□ -0.8
PHGDH-224ENST00000641711 TRBV5-4A0A0C4DH59 114 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 GOLGA8CPA6NN73 597 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 TMEM233B4DJY2 109 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 UBFD1O14562 309 aaKnown RBP10.06□□□□□ -0.8
PHGDH-224ENST00000641711 GFRA3O60609 400 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 SUPT7LO94864 414 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 PSMG1O95456 288 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 CER1O95813 267 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 TSPAN12O95859 305 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 PAK4O96013 591 aaPredicted RBP10.06□□□□□ -0.8
PHGDH-224ENST00000641711 C1SP09871 688 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 ZNF883P0CG24 379 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 IGFALSP35858 605 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 TRIM23P36406 574 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 SPINT3P49223 89 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 CDKN1CP49918 316 aaPredicted RBP10.06□□□□□ -0.8
PHGDH-224ENST00000641711 ATP4BP51164 291 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 C21orf59P57076 290 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 KIAA1024LP59773 190 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 IRX1P78414 480 aaPredicted RBP10.06□□□□□ -0.8
PHGDH-224ENST00000641711 SLC25A3Q00325 362 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 PTSQ03393 145 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 PTK2BQ14289 1009 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 ACOX1Q15067 660 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 IRF4Q15306 451 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 ZRSR2Q15696 482 aaKnown RBP10.06□□□□□ -0.8
PHGDH-224ENST00000641711 PDCD2Q16342 344 aaPredicted RBP10.06□□□□□ -0.8
PHGDH-224ENST00000641711 WSCD2Q2TBF2 565 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 UGT3A2Q3SY77 523 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 CMPK2Q5EBM0 449 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 HENMT1Q5T8I9 393 aaKnown RBP10.06□□□□□ -0.8
PHGDH-224ENST00000641711 GCNT7Q6ZNI0 430 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 LYSMD3Q7Z3D4 306 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 TSPAN33Q86UF1 283 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 MYLK4Q86YV6 388 aaPredicted RBP10.06□□□□□ -0.8
PHGDH-224ENST00000641711 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.06□□□□□ -0.8
PHGDH-224ENST00000641711 CLYBLQ8N0X4 340 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 FAM122AQ96E09 287 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 PHF21BQ96EK2 531 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 KLHDC7BQ96G42 594 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 SLC6A18Q96N87 628 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 GPR21Q99679 349 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 TACO1Q9BSH4 297 aaKnown RBP10.06□□□□□ -0.8
PHGDH-224ENST00000641711 ZSCAN5AQ9BUG6 496 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 SHCBP1LQ9BZQ2 653 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 TNFRSF12AQ9NP84 129 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 NDE1Q9NXR1 346 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 STX18Q9P2W9 335 aaKnown RBP10.06□□□□□ -0.8
PHGDH-224ENST00000641711 STOML1Q9UBI4 398 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 TRMT6Q9UJA5 497 aaKnown RBP10.06□□□□□ -0.8
PHGDH-224ENST00000641711 PRPF19Q9UMS4 504 aaKnown RBP10.06□□□□□ -0.8
PHGDH-224ENST00000641711 SLC30A1Q9Y6M5 507 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 VPS13AQ96RL7 3174 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 TMEM131Q92545 1883 aa10.06□□□□□ -0.8
PHGDH-224ENST00000641711 ARID1BQ8NFD5 2236 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-224ENST00000641711 UBXN8O00124 270 aa10.05□□□□□ -0.8
PHGDH-224ENST00000641711 TLR4O00206 839 aa10.05□□□□□ -0.8
PHGDH-224ENST00000641711 GAPDHSO14556 408 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-224ENST00000641711 ARHGAP33O14559 1287 aa10.05□□□□□ -0.8
PHGDH-224ENST00000641711 PRMT5O14744 637 aaPredicted RBP10.05□□□□□ -0.8
PHGDH-224ENST00000641711 CDK14O94921 469 aa10.05□□□□□ -0.8
PHGDH-224ENST00000641711 CLDN7O95471 211 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms