RNA–Protein interactions for RNA: ENST00000641074.1

PHGDH-209, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,780 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-209ENST00000641074 TBCCQ15814 346 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.81■□□□□ 0.44
PHGDH-209ENST00000641074 LETMD1Q6P1Q0 360 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 ASRGL1Q7L266 308 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 LRRTM4Q86VH4 590 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 TCAIMQ8N3R3 496 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 CEP70Q8NHQ1 597 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 HM13Q8TCT9 377 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 SLC7A6OSQ96CW6 309 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-209ENST00000641074 C3orf30Q96M34 536 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 TUBB1Q9H4B7 451 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 ARHGEF3Q9NR81 526 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 PHPT1Q9NRX4 125 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-209ENST00000641074 SLC23A2Q9UGH3 650 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 EBF1Q9UH73 591 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 PTGDR2Q9Y5Y4 395 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 PIP5K1BO14986 540 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 UROSP10746 265 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 MYCLP1P12525 358 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-209ENST00000641074 MAP4P27816 1152 aaKnown RBP17.81■□□□□ 0.44
PHGDH-209ENST00000641074 FAM83HQ6ZRV2 1179 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-209ENST00000641074 ASB12Q8WXK4 309 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 ATP6V1E2Q96A05 226 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 KLHL29Q96CT2 875 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 MYOCQ99972 504 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 LMAN1LQ9HAT1 526 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 PRDM6Q9NQX0 595 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 ITM2CQ9NQX7 267 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 TM7SF3Q9NS93 570 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 G3BP2Q9UN86 482 aaKnown RBP17.81■□□□□ 0.44
PHGDH-209ENST00000641074 ANGPTL3Q9Y5C1 460 aa17.81■□□□□ 0.44
PHGDH-209ENST00000641074 ATP6AP2A0A1C7CYW4 349 aa17.8■□□□□ 0.44
PHGDH-209ENST00000641074 ATP6AP2O75787 350 aa17.8■□□□□ 0.44
PHGDH-209ENST00000641074 OTCP00480 354 aa17.8■□□□□ 0.44
PHGDH-209ENST00000641074 CATP04040 527 aaKnown RBP17.8■□□□□ 0.44
PHGDH-209ENST00000641074 ESRRAP11474 423 aaPredicted RBP17.8■□□□□ 0.44
PHGDH-209ENST00000641074 CALB2P22676 271 aa17.8■□□□□ 0.44
PHGDH-209ENST00000641074 ARL1P40616 181 aaPredicted RBP17.8■□□□□ 0.44
PHGDH-209ENST00000641074 MAPK9P45984 424 aa17.8■□□□□ 0.44
PHGDH-209ENST00000641074 BDKRB1P46663 353 aa17.8■□□□□ 0.44
PHGDH-209ENST00000641074 PLOD1Q02809 727 aaPredicted RBP17.8■□□□□ 0.44
PHGDH-209ENST00000641074 PRKCQQ04759 706 aa17.8■□□□□ 0.44
PHGDH-209ENST00000641074 TRAF3Q13114 568 aa17.8■□□□□ 0.44
PHGDH-209ENST00000641074 CCSMST1Q4G0I0 132 aa17.8■□□□□ 0.44
PHGDH-209ENST00000641074 AMZ2Q86W34 360 aa17.8■□□□□ 0.44
PHGDH-209ENST00000641074 KIF2BQ8N4N8 673 aa17.8■□□□□ 0.44
PHGDH-209ENST00000641074 CDYL2Q8N8U2 506 aa17.8■□□□□ 0.44
PHGDH-209ENST00000641074 OR4F6Q8NGB9 312 aa17.8■□□□□ 0.44
PHGDH-209ENST00000641074 FOPNLQ96NB1 174 aa17.8■□□□□ 0.44
PHGDH-209ENST00000641074 CATSPER2Q96P56 530 aa17.8■□□□□ 0.44
PHGDH-209ENST00000641074 NUSAP1Q9BXS6 441 aaKnown RBP17.8■□□□□ 0.44
PHGDH-209ENST00000641074 BTBD1Q9H0C5 482 aa17.8■□□□□ 0.44
PHGDH-209ENST00000641074 SLC32A1Q9H598 525 aa17.8■□□□□ 0.44
PHGDH-209ENST00000641074 ZNF385DQ9H6B1 395 aa17.8■□□□□ 0.44
PHGDH-209ENST00000641074 POLMQ9NP87 494 aaPredicted RBP17.8■□□□□ 0.44
PHGDH-209ENST00000641074 LNPEPQ9UIQ6 1025 aa17.8■□□□□ 0.44
PHGDH-209ENST00000641074 BTRCQ9Y297 605 aa17.8■□□□□ 0.44
PHGDH-209ENST00000641074 ST14Q9Y5Y6 855 aa17.8■□□□□ 0.44
PHGDH-209ENST00000641074 KRBA1A5PL33 1030 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 CHURC1-FNTBB4DL54 471 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 GPR89AB7ZAQ6 455 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 FUCA1P04066 466 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 GPR89BP0CG08 455 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 EPB42P16452 691 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 SLC6A12P48065 614 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 CCNG1P51959 295 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 DGKEP52429 567 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 TTC23LQ6PF05 361 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 LARP4Q71RC2 724 aaKnown RBP eCLIP17.79■□□□□ 0.442e-6■□□□□ 11.3
PHGDH-209ENST00000641074 SYT13Q7L8C5 426 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 DDIASQ8IXT1 998 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 PGBD3Q8N328 593 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 CPSF7Q8N684 471 aaKnown RBP17.79■□□□□ 0.44
PHGDH-209ENST00000641074 OR2T34Q8NGX1 318 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 FBXL8Q96CD0 374 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 MARK4Q96L34 752 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 APOOQ9BUR5 198 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 LRMDAQ9H2I8 198 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 DPEP2Q9H4A9 486 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 C2orf42Q9NWW7 574 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 USP36Q9P275 1121 aaKnown RBP17.79■□□□□ 0.44
PHGDH-209ENST00000641074 ZNHIT2Q9UHR6 403 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 TAGLN3Q9UI15 199 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 STK38LQ9Y2H1 464 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 DNMT3AQ9Y6K1 912 aaPredicted RBP17.79■□□□□ 0.44
PHGDH-209ENST00000641074 CAPN7Q9Y6W3 813 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 ZFC3H1O60293 1989 aaKnown RBP17.79■□□□□ 0.44
PHGDH-209ENST00000641074 HNRNPCL1O60812 293 aaKnown RBP17.79■□□□□ 0.44
PHGDH-209ENST00000641074 KATNA1O75449 491 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 C1orf105O95561 183 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 LINC00032P0C843 101 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 RASSF2P50749 326 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 KLF10Q13118 480 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 PTCHD3Q3KNS1 767 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 CHSY3Q70JA7 882 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 MILR1Q7Z6M3 343 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 TRIM69Q86WT6 500 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 ADHFE1Q8IWW8 467 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 SYNPOQ8N3V7 929 aa17.79■□□□□ 0.44
PHGDH-209ENST00000641074 OXR1Q8N573 874 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms