RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 DCAKDQ8WVC6 231 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 RSC1A1Q92681 617 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 LINGO1Q96FE5 620 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 TRIT1Q9H3H1 467 aaKnown RBP12.85□□□□□ -0.35
GTF3A-209ENST00000640289 XKR8Q9H6D3 395 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 MVB12BQ9H7P6 319 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 UCK1Q9HA47 277 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 RDH14Q9HBH5 336 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 OGFRQ9NZT2 677 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 PLAGL1Q9UM63 463 aa12.85□□□□□ -0.35
GTF3A-209ENST00000640289 TDRKHQ9Y2W6 561 aaKnown RBP12.85□□□□□ -0.35
GTF3A-209ENST00000640289 ZFC3H1O60293 1989 aaKnown RBP12.85□□□□□ -0.35
GTF3A-209ENST00000640289 WDR87Q6ZQQ6 2873 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 DMXL1Q9Y485 3027 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 ARHGEF17Q96PE2 2063 aaPredicted RBP12.84□□□□□ -0.35
GTF3A-209ENST00000640289 UBXN7O94888 489 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 MATN4O95460 622 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 C1orf105O95561 183 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 TOP3BO95985 862 aaKnown RBP12.84□□□□□ -0.35
GTF3A-209ENST00000640289 SHBGP04278 402 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 INHBAP08476 426 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 MPC1LP0DKB6 136 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 CBSLP0DN79 551 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 ENO3P13929 434 aaPredicted RBP12.84□□□□□ -0.35
GTF3A-209ENST00000640289 ZNF37AP17032 561 aaPredicted RBP12.84□□□□□ -0.35
GTF3A-209ENST00000640289 TYRP1P17643 537 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 CSF2RBP32927 897 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 CBSP35520 551 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 HSD17B3P37058 310 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 EPHA4P54764 986 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 SLC12A2P55011 1212 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 GRB7Q14451 532 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 MROH9Q5TGP6 573 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 HES3Q5TGS1 186 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 NEK10Q6ZWH5 1172 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 MARCH9Q86YJ5 346 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 CHCHD4Q8N4Q1 142 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 LMNTD1Q8N9Z9 388 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 OR4E2Q8NGC2 313 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 OR10G6Q8NH81 332 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 ANKRD49Q8WVL7 239 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 ADAMTS14Q8WXS8 1223 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 CAVIN3Q969G5 261 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 AHCYL2Q96HN2 611 aaKnown RBP12.84□□□□□ -0.35
GTF3A-209ENST00000640289 FOPNLQ96NB1 174 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 GFM1Q96RP9 751 aaKnown RBP12.84□□□□□ -0.35
GTF3A-209ENST00000640289 NUDT22Q9BRQ3 303 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 GPAMQ9HCL2 828 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 TMEM9Q9P0T7 183 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 ADAMTS6Q9UKP5 1117 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 IKZF3Q9UKT9 509 aa12.84□□□□□ -0.35
GTF3A-209ENST00000640289 CEP250Q9BV73 2442 aa12.83□□□□□ -0.35
GTF3A-209ENST00000640289 CFAP54Q96N23 3096 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 ARHGEF33A8MVX0 844 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 D6RAR5 112 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 EIF3FO00303 357 aaPredicted RBP12.83□□□□□ -0.36
GTF3A-209ENST00000640289 PSIP1O75475 530 aaKnown RBP12.83□□□□□ -0.36
GTF3A-209ENST00000640289 WISP3O95389 354 aaPredicted RBP12.83□□□□□ -0.36
GTF3A-209ENST00000640289 MT-CO3P00414 261 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 PROS1P07225 676 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 STMN1P16949 149 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 AMD1P17707 334 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 MPSTP25325 297 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 RGS4P49798 205 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 PDX1P52945 283 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 IL2P60568 153 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 GPLD1P80108 840 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 ILF2Q12905 390 aaKnown RBP12.83□□□□□ -0.36
GTF3A-209ENST00000640289 FOXC1Q12948 553 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 SPIDRQ14159 915 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 ZKSCAN8Q15776 578 aaPredicted RBP12.83□□□□□ -0.36
GTF3A-209ENST00000640289 MAP9Q49MG5 647 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.83□□□□□ -0.36
GTF3A-209ENST00000640289 CDCP2Q5VXM1 449 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 DCUN1D3Q8IWE4 304 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 MYO1HQ8N1T3 1032 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 SPATA6LQ8N4H0 392 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 ZFPM2Q8WW38 1151 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 LCN9Q8WX39 176 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 NCSTNQ92542 709 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 TSPAN17Q96FV3 270 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 IL17FQ96PD4 163 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 DHRS4Q9BTZ2 278 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 UNKQ9C0B0 810 aaKnown RBP12.83□□□□□ -0.36
GTF3A-209ENST00000640289 ZMYND15Q9H091 742 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 POLG2Q9UHN1 485 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 ICKQ9UPZ9 632 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 IKBKGQ9Y6K9 419 aa12.83□□□□□ -0.36
GTF3A-209ENST00000640289 PIKFYVEQ9Y2I7 2098 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 FAM149AA5PLN7 773 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 OR6C74A6NCV1 312 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 BTN3A3O00478 584 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 ZW10O43264 779 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 DUX1O43812 170 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 HYAL3O43820 417 aaPredicted RBP12.82□□□□□ -0.36
GTF3A-209ENST00000640289 CPNE6O95741 557 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 RPN2P04844 631 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 CDK4P11802 303 aa12.82□□□□□ -0.36
GTF3A-209ENST00000640289 HOXB3P14651 431 aaPredicted RBP12.82□□□□□ -0.36
GTF3A-209ENST00000640289 CAPZBP47756 277 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms