RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 SNRNP200O75643 2136 aaKnown RBP16.34■□□□□ 0.21
SMN2-216ENST00000638794 C2orf74A8MZ97 194 aa16.34■□□□□ 0.21
SMN2-216ENST00000638794 ZNF189O75820 626 aaPredicted RBP16.34■□□□□ 0.21
SMN2-216ENST00000638794 CAPN1P07384 714 aa16.34■□□□□ 0.21
SMN2-216ENST00000638794 CYP2A7P20853 494 aa16.34■□□□□ 0.21
SMN2-216ENST00000638794 CACNG1Q06432 222 aa16.34■□□□□ 0.21
SMN2-216ENST00000638794 RPA4Q13156 261 aa16.34■□□□□ 0.21
SMN2-216ENST00000638794 PRKG2Q13237 762 aa16.34■□□□□ 0.21
SMN2-216ENST00000638794 DBN1Q16643 649 aa16.34■□□□□ 0.21
SMN2-216ENST00000638794 NADK2Q4G0N4 442 aa16.34■□□□□ 0.21
SMN2-216ENST00000638794 FAM198BQ6UWH4 519 aa16.34■□□□□ 0.21
SMN2-216ENST00000638794 ADGRF3Q8IZF5 1079 aa16.34■□□□□ 0.21
SMN2-216ENST00000638794 TFGQ92734 400 aaPredicted RBP16.34■□□□□ 0.21
SMN2-216ENST00000638794 CDKN2AIPNLQ96HQ2 116 aa16.34■□□□□ 0.21
SMN2-216ENST00000638794 TCFL5Q9UL49 500 aa16.34■□□□□ 0.21
SMN2-216ENST00000638794 SPTBN1Q01082 2364 aaKnown RBP16.34■□□□□ 0.21
SMN2-216ENST00000638794 PCSK5Q92824 1860 aa16.33■□□□□ 0.21
SMN2-216ENST00000638794 CCDC88CQ9P219 2028 aa16.33■□□□□ 0.21
SMN2-216ENST00000638794 SHANK1Q9Y566 2161 aa16.33■□□□□ 0.2
SMN2-216ENST00000638794 GOLGA6L9A6NEM1 432 aa16.33■□□□□ 0.2
SMN2-216ENST00000638794 TTLL8A6PVC2 850 aa16.33■□□□□ 0.2
SMN2-216ENST00000638794 MAP3K7O43318 606 aa16.33■□□□□ 0.2
SMN2-216ENST00000638794 AP2A2O94973 939 aa16.33■□□□□ 0.2
SMN2-216ENST00000638794 PTMAP06454 111 aaKnown RBP16.33■□□□□ 0.2
SMN2-216ENST00000638794 ZNF75DP51815 510 aa16.33■□□□□ 0.2
SMN2-216ENST00000638794 VAV2P52735 878 aa16.33■□□□□ 0.2
SMN2-216ENST00000638794 GDF10P55107 478 aa16.33■□□□□ 0.2
SMN2-216ENST00000638794 PTCHD3Q3KNS1 767 aa16.33■□□□□ 0.2
SMN2-216ENST00000638794 PAPD7Q5XG87 772 aaKnown RBP16.33■□□□□ 0.2
SMN2-216ENST00000638794 ZNF449Q6P9G9 518 aa16.33■□□□□ 0.2
SMN2-216ENST00000638794 CDHR3Q6ZTQ4 885 aa16.33■□□□□ 0.2
SMN2-216ENST00000638794 STYXQ8WUJ0 223 aa16.33■□□□□ 0.2
SMN2-216ENST00000638794 ACTR10Q9NZ32 417 aa16.33■□□□□ 0.2
SMN2-216ENST00000638794 SMARCAL1Q9NZC9 954 aa16.33■□□□□ 0.2
SMN2-216ENST00000638794 AMFRQ9UKV5 643 aa16.33■□□□□ 0.2
SMN2-216ENST00000638794 PACSIN2Q9UNF0 486 aaPredicted RBP16.33■□□□□ 0.2
SMN2-216ENST00000638794 ICKQ9UPZ9 632 aa16.33■□□□□ 0.2
SMN2-216ENST00000638794 PRSS21Q9Y6M0 314 aa16.33■□□□□ 0.2
SMN2-216ENST00000638794 CCDC78A2IDD5 438 aa16.32■□□□□ 0.2
SMN2-216ENST00000638794 E7EQ34 232 aa16.32■□□□□ 0.2
SMN2-216ENST00000638794 ZNF749O43361 778 aa16.32■□□□□ 0.2
SMN2-216ENST00000638794 CEACAM4O75871 244 aa16.32■□□□□ 0.2
SMN2-216ENST00000638794 TMEM63AO94886 807 aa16.32■□□□□ 0.2
SMN2-216ENST00000638794 AP2A1O95782 977 aa16.32■□□□□ 0.2
SMN2-216ENST00000638794 GSTM1P09488 218 aa16.32■□□□□ 0.2
SMN2-216ENST00000638794 UQCRFS1P47985 274 aa16.32■□□□□ 0.2
SMN2-216ENST00000638794 ITGA1P56199 1179 aa16.32■□□□□ 0.2
SMN2-216ENST00000638794 GSTM4Q03013 218 aa16.32■□□□□ 0.2
SMN2-216ENST00000638794 KLF1Q13351 362 aaPredicted RBP16.32■□□□□ 0.2
SMN2-216ENST00000638794 NCF4Q15080 339 aa16.32■□□□□ 0.2
SMN2-216ENST00000638794 P3H1Q32P28 736 aa16.32■□□□□ 0.2
SMN2-216ENST00000638794 SPESP1Q6UW49 350 aa16.32■□□□□ 0.2
SMN2-216ENST00000638794 PEX26Q7Z412 305 aa16.32■□□□□ 0.2
SMN2-216ENST00000638794 TAB3Q8N5C8 712 aaPredicted RBP16.32■□□□□ 0.2
SMN2-216ENST00000638794 TTC13Q8NBP0 860 aa16.32■□□□□ 0.2
SMN2-216ENST00000638794 OR5AR1Q8NGP9 310 aa16.32■□□□□ 0.2
SMN2-216ENST00000638794 CPT1CQ8TCG5 803 aa16.32■□□□□ 0.2
SMN2-216ENST00000638794 MRFAP1L1Q96HT8 127 aa16.32■□□□□ 0.2
SMN2-216ENST00000638794 TMEM121Q9BTD3 319 aa16.32■□□□□ 0.2
SMN2-216ENST00000638794 SLC7A5P2Q9GIP4 190 aa16.32■□□□□ 0.2
SMN2-216ENST00000638794 SERTAD3Q9UJW9 196 aa16.32■□□□□ 0.2
SMN2-216ENST00000638794 R3HDM2Q9Y2K5 976 aaKnown RBP16.32■□□□□ 0.2
SMN2-216ENST00000638794 MROH6A6NGR9 719 aa16.31■□□□□ 0.2
SMN2-216ENST00000638794 OR51F1A6NGY5 319 aa16.31■□□□□ 0.2
SMN2-216ENST00000638794 LIN7AO14910 233 aaPredicted RBP16.31■□□□□ 0.2
SMN2-216ENST00000638794 GP1BBP13224 206 aa16.31■□□□□ 0.2
SMN2-216ENST00000638794 MSNP26038 577 aaKnown RBP16.31■□□□□ 0.2
SMN2-216ENST00000638794 NSG1P42857 185 aa16.31■□□□□ 0.2
SMN2-216ENST00000638794 CCDC38Q502W7 563 aa16.31■□□□□ 0.2
SMN2-216ENST00000638794 ZNF385CQ66K41 422 aaPredicted RBP16.31■□□□□ 0.2
SMN2-216ENST00000638794 KIAA1328Q86T90 577 aa16.31■□□□□ 0.2
SMN2-216ENST00000638794 TRIM73Q86UV7 250 aa16.31■□□□□ 0.2
SMN2-216ENST00000638794 ZBTB2Q8N680 514 aa16.31■□□□□ 0.2
SMN2-216ENST00000638794 EFCAB3Q8N7B9 438 aa16.31■□□□□ 0.2
SMN2-216ENST00000638794 UBL4BQ8N7F7 174 aa16.31■□□□□ 0.2
SMN2-216ENST00000638794 C19orf47Q8N9M1 422 aaKnown RBP16.31■□□□□ 0.2
SMN2-216ENST00000638794 FDCSPQ8NFU4 85 aa16.31■□□□□ 0.2
SMN2-216ENST00000638794 SLC35B2Q8TB61 432 aa16.31■□□□□ 0.2
SMN2-216ENST00000638794 ELMO1Q92556 727 aa16.31■□□□□ 0.2
SMN2-216ENST00000638794 ALS2CR12Q96Q35 445 aa16.31■□□□□ 0.2
SMN2-216ENST00000638794 DPH2Q9BQC3 489 aaPredicted RBP16.31■□□□□ 0.2
SMN2-216ENST00000638794 FAM60AQ9NP50 221 aa16.31■□□□□ 0.2
SMN2-216ENST00000638794 ASF1AQ9Y294 204 aa16.31■□□□□ 0.2
SMN2-216ENST00000638794 TCRBV7S2A1N4TA0A589 114 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 C9J4A7 227 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 HCRTR1O43613 425 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 VPS4BO75351 444 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 SORBS2O94875 1100 aaKnown RBP16.3■□□□□ 0.2
SMN2-216ENST00000638794 FTCDO95954 541 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 UGT2B7P16662 529 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 PSMA3P25788 255 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 ACADLP28330 430 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 FOXN2P32314 431 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 SHMT2P34897 504 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 ATP1A4Q13733 1029 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 ITIH4Q14624 930 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 BRD3Q15059 726 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 DEFB110Q30KQ9 67 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 PACS1Q6VY07 963 aa16.3■□□□□ 0.2
SMN2-216ENST00000638794 NAPRTQ6XQN6 538 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms