RNA–Protein interactions for RNA: ENST00000637968.1

SCN1A-216, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-216ENST00000637968 ATP13A4Q4VNC1 1196 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 HYIQ5T013 277 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 PDSS1Q5T2R2 415 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 MBLAC2Q68D91 279 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 DNAJC24Q6P3W2 148 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 PAMR1Q6UXH9 720 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 RNF180Q86T96 592 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 PDZD9Q8IXQ8 264 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 ADGRF4Q8IZF3 695 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 UNC5BQ8IZJ1 945 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 ZDHHC14Q8IZN3 488 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 OR52H1Q8NGJ2 320 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 ADAM32Q8TC27 787 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 ELP5Q8TE02 316 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 ADAMTS14Q8WXS8 1223 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 RFKQ969G6 155 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 ZNF566Q969W8 418 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 SLC35C1Q96A29 364 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 SH2D3AQ9BRG2 576 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 C11orf70Q9BRQ4 267 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 TGIF2Q9GZN2 237 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 LHX5Q9H2C1 402 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 HSPBP1Q9NZL4 362 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 OPTCQ9UBM4 332 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 SLC9A2Q9UBY0 812 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 ZNF112Q9UJU3 913 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 RPS6KA6Q9UK32 745 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 MAGED2Q9UNF1 606 aaPredicted RBP5.65□□□□□ -1.51
SCN1A-216ENST00000637968 INVSQ9Y283 1065 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 PPP2R3BQ9Y5P8 575 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 ARHGAP23Q9P227 1491 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 A0A1B0GWJ7 208 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 EEF2KO00418 725 aaKnown RBP5.65□□□□□ -1.51
SCN1A-216ENST00000637968 ACOT8O14734 319 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 CLN5O75503 358 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 FAM155BO75949 473 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 AKAP3O75969 853 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 CIAO1O76071 339 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 CNTN5O94779 1100 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 LYPLA2O95372 231 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 AMHP03971 560 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 ALPLP05186 524 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 APRTP07741 180 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 ACADMP11310 421 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 HK1P19367 917 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 ADORA1P30542 326 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 CA5AP35218 305 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 SPRP35270 261 aaPredicted RBP5.65□□□□□ -1.51
SCN1A-216ENST00000637968 MAP2K4P45985 399 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 ARSFP54793 590 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 OSTNP61366 133 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 RRAS2P62070 204 aaPredicted RBP5.65□□□□□ -1.51
SCN1A-216ENST00000637968 GPR17Q13304 367 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 CHRNA6Q15825 494 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 CTF1Q16619 201 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 UAP1L1Q3KQV9 507 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 MOB2Q70IA6 237 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.65□□□□□ -1.51
SCN1A-216ENST00000637968 COMTD1Q86VU5 262 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 ADHFE1Q8IWW8 467 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 C2orf69Q8N8R5 385 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 KDF1Q8NAX2 398 aaPredicted RBP5.65□□□□□ -1.51
SCN1A-216ENST00000637968 KCTD6Q8NC69 237 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 OR6B3Q8NGW1 331 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 DTD1Q8TEA8 209 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 TCEAL4Q96EI5 215 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 MRPL48Q96GC5 212 aaKnown RBP5.65□□□□□ -1.51
SCN1A-216ENST00000637968 NEDD4LQ96PU5 975 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 TBCDQ9BTW9 1192 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 OPA3Q9H6K4 179 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 TASP1Q9H6P5 420 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 ELAC1Q9H777 363 aaKnown RBP5.65□□□□□ -1.51
SCN1A-216ENST00000637968 LRRC4Q9HBW1 653 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 ZBTB26Q9HCK0 441 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 CHRAC1Q9NRG0 131 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 RNF181Q9P0P0 153 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 ZNF639Q9UID6 485 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 KIF25Q9UIL4 384 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 NOD1Q9Y239 953 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 DAGLAQ9Y4D2 1042 aa5.65□□□□□ -1.51
SCN1A-216ENST00000637968 TRBV23-1A0A0A0MS06 115 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 A0A1B0GV90 55 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 CHURC1-FNTBB4DL54 471 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 L7N2F9 121 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 MMP20O60882 483 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 SGPL1O95470 568 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 OR56A5P0C7T3 313 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 RD3LP0DJH9 198 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 PAICSP22234 425 aaKnown RBP5.64□□□□□ -1.51
SCN1A-216ENST00000637968 LCN1P31025 176 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 MC2RQ01718 297 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 EXOSC2Q13868 293 aaKnown RBP5.64□□□□□ -1.51
SCN1A-216ENST00000637968 USP10Q14694 798 aaKnown RBP5.64□□□□□ -1.51
SCN1A-216ENST00000637968 OCLNQ16625 522 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 DOK7Q18PE1 504 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 EIF2S3LQ2VIR3 472 aaKnown RBP5.64□□□□□ -1.51
SCN1A-216ENST00000637968 ANKRD39Q53RE8 183 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 TFDP3Q5H9I0 405 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 STXBP5Q5T5C0 1151 aa5.64□□□□□ -1.51
SCN1A-216ENST00000637968 ZNF470Q6ECI4 717 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms