RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 UCK2Q9BZX2 261 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 GPN1Q9HCN4 374 aaPredicted RBP17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 FKBPLQ9UIM3 349 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 C13orf42A0A1B0GVH6 325 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 NME6O75414 186 aaPredicted RBP17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 OGFOD2Q6N063 350 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 KYAT3Q6YP21 454 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 RBM44Q6ZP01 1051 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 SLC24A5Q71RS6 500 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 NXPE1Q8N323 547 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 SFRP1Q8N474 314 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 OR8S1Q8NH09 359 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 SLC35G5Q96KT7 338 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 FBRSQ9HAH7 460 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 HPF1Q9NWY4 346 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 DIP2AQ14689 1571 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 LCA5LO95447 670 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 PSMG1O95456 288 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 CLRN1P58418 232 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 NOMO3P69849 1222 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 RPL6Q02878 288 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 RASGEF1BQ0VAM2 473 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 NOMO1Q15155 1222 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 DTX3Q8N9I9 347 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 TWIST2Q8WVJ9 160 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 RWDD3Q9Y3V2 267 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 KRT36O76013 467 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 IPO13O94829 963 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 CNOT4O95628 575 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 CSF2P04141 144 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 EDNRAP25101 427 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 AP1S1P61966 158 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 HTRA3P83110 453 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 BMT2Q1RMZ1 405 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 TRAPPC6BQ86SZ2 158 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 NPAS4Q8IUM7 802 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 ZSCAN4Q8NAM6 433 aaPredicted RBP17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 OR8K3Q8NH51 312 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 AP3S1Q92572 193 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 CAVIN3Q969G5 261 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 SPATA7Q9P0W8 599 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 TRPM1Q7Z4N2 1603 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 DHRS12A0PJE2 317 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 GLOD5A6NK44 160 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 CSTBP04080 98 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 FHP07954 510 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 EDN3P14138 238 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 PSMD7P51665 324 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 PRKAA2P54646 552 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 RTP1P59025 263 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 ADGRE1Q14246 886 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 ZNF792Q3KQV3 632 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 VARS2Q5ST30 1063 aaKnown RBP17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 ZNF350Q9GZX5 532 aa17.56■□□□□ 0.4
CACNA1A-227ENST00000636549 MEN1O00255 615 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 SLC16A5O15375 505 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 UGT1A9O60656 530 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 NR2F6P10588 404 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 UGT1A6P19224 532 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 UGT1A1P22309 533 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 UGT1A4P22310 534 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 UGT1A3P35503 534 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 CSTF1Q05048 431 aaKnown RBP17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 TARDBPQ13148 414 aaKnown RBP eCLIP17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 C1orf186Q6ZWK4 172 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 ABHD13Q7L211 337 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 CHCHD6Q9BRQ6 235 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 BCO2Q9BYV7 579 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 CDH19Q9H159 772 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 UGT1A7Q9HAW7 530 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 UGT1A10Q9HAW8 530 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 UGT1A8Q9HAW9 530 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 C2orf92A0A1B0GVN3 265 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 H3BQF6 201 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 IGFBP5P24593 272 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 TTKP33981 857 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 MAZP56270 477 aaKnown RBP17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 C1orf61Q13536 156 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 ZNF234Q14588 700 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 IL23RQ5VWK5 629 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 SCAMP5Q8TAC9 235 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 CCNB1IP1Q9NPC3 277 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 ENAMQ9NRM1 1142 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 TRAF6Q9Y4K3 522 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 KCNU1A8MYU2 1149 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 CACNG1Q06432 222 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 TEAD2Q15562 447 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 NNATQ16517 81 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 PHOSPHO1Q8TCT1 267 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 ADH5P11766 374 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 FASLGP48023 281 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 ZNF844Q08AG5 666 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 ENPP2Q13822 863 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 PRR18Q8N4B5 295 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 PPTC7Q8NI37 304 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 BTN2A3PQ96KV6 586 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 ZSWIM3Q96MP5 696 aa17.55■□□□□ 0.4
CACNA1A-227ENST00000636549 SERINC1Q9NRX5 453 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms