RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	ZNF232	Q9UNY5	417 aa		14.07	□□□□□ -0.16
NEDD4L-238	ENST00000635997	COPG1	Q9Y678	874 aa	Known RBP	14.07	□□□□□ -0.16
NEDD4L-238	ENST00000635997	ADAM12	O43184	909 aa		14.07	□□□□□ -0.16
NEDD4L-238	ENST00000635997	PRAMEF11	O60813	436 aa		14.07	□□□□□ -0.16
NEDD4L-238	ENST00000635997	LAMP2	P13473	410 aa		14.07	□□□□□ -0.16
NEDD4L-238	ENST00000635997	SOX9	P48436	509 aa		14.07	□□□□□ -0.16
NEDD4L-238	ENST00000635997	HSPA13	P48723	471 aa		14.07	□□□□□ -0.16
NEDD4L-238	ENST00000635997	COPZ1	P61923	177 aa		14.07	□□□□□ -0.16
NEDD4L-238	ENST00000635997	LMAN2	Q12907	356 aa		14.07	□□□□□ -0.16
NEDD4L-238	ENST00000635997	ZNF549	Q6P9A3	640 aa		14.07	□□□□□ -0.16
NEDD4L-238	ENST00000635997	ZC3HC1	Q86WB0	502 aa	Known RBP	14.07	□□□□□ -0.16
NEDD4L-238	ENST00000635997	FBXW8	Q8N3Y1	598 aa		14.07	□□□□□ -0.16
NEDD4L-238	ENST00000635997	DCAF4L2	Q8NA75	395 aa		14.07	□□□□□ -0.16
NEDD4L-238	ENST00000635997	EEF1AKMT1	Q8WVE0	214 aa		14.07	□□□□□ -0.16
NEDD4L-238	ENST00000635997	SLC9A6	Q92581	669 aa		14.07	□□□□□ -0.16
NEDD4L-238	ENST00000635997	BTBD9	Q96Q07	612 aa		14.07	□□□□□ -0.16
NEDD4L-238	ENST00000635997	FEM1A	Q9BSK4	669 aa		14.07	□□□□□ -0.16
NEDD4L-238	ENST00000635997	DCUN1D5	Q9BTE7	237 aa		14.07	□□□□□ -0.16
NEDD4L-238	ENST00000635997	TMEM109	Q9BVC6	243 aa		14.07	□□□□□ -0.16
NEDD4L-238	ENST00000635997	PPM1H	Q9ULR3	514 aa		14.07	□□□□□ -0.16
NEDD4L-238	ENST00000635997	TOGARAM1	Q9Y4F4	1720 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	DYTN	A2CJ06	578 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	ITM2A	O43736	263 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	CCNF	P41002	786 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	NEK2	P51955	445 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	C16orf72	Q14CZ0	275 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	CASP12	Q6UXS9	341 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	ZBTB46	Q86UZ6	589 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	CPSF7	Q8N684	471 aa	Known RBP	14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	OR2T12	Q8NG77	320 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	STARD8	Q92502	1023 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	RNF31	Q96EP0	1072 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	ARMC7	Q9H6L4	198 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	KCNK12	Q9HB15	430 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	USP29	Q9HBJ7	922 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	NKX1-2	Q9UD57	310 aa	Predicted RBP	14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	SLC9A8	Q9Y2E8	581 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	KLHL20	Q9Y2M5	609 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	URAD	A6NGE7	173 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	TRAFD1	O14545	582 aa	Predicted RBP	14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	LEFTY1	O75610	366 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	GNAZ	P19086	355 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	PREP	P48147	710 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	STX4	Q12846	297 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	INTS11	Q5TA45	600 aa	Known RBP	14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	CAND1	Q86VP6	1230 aa	Known RBP	14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	IL22RA1	Q8N6P7	574 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	NUS1	Q96E22	293 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	SLC22A14	Q9Y267	594 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	MAP4K5	Q9Y4K4	846 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	UBR3	Q6ZT12	1888 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	FAM149A	A5PLN7	773 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	GABRD	O14764	452 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	CNOT3	O75175	753 aa	Known RBP	14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	OAZ2	O95190	189 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	TGFB1	P01137	390 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	OGN	P20774	298 aa	Known RBP	14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	TCEA1	P23193	301 aa	Known RBP	14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	SERPINB10	P48595	397 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	GALK1	P51570	392 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	ZNHIT3	Q15649	155 aa	Predicted RBP	14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	ZSCAN1	Q8NBB4	408 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	DCAKD	Q8WVC6	231 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	ZNF599	Q96NL3	588 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	CLSTN3	Q9BQT9	956 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	ZNF780B	Q9Y6R6	833 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997		B4DGG1	531 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	TRIM38	O00635	465 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	SLC28A2	O43868	658 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	TIPRL	O75663	272 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	ITGAX	P20702	1163 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	CSTF2	P33240	577 aa	Known RBP eCLIP	14.06	□□□□□ -0.16	3e-7	■■■■□ 22.2
NEDD4L-238	ENST00000635997	TMEM145	Q8NBT3	493 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	ZFP28	Q8NHY6	868 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	VANGL1	Q8TAA9	524 aa	Predicted RBP	14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	TCEAL4	Q96EI5	215 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	DGCR6L	Q9BY27	220 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	TRIT1	Q9H3H1	467 aa	Known RBP	14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	TMEM248	Q9NWD8	314 aa		14.06	□□□□□ -0.16
NEDD4L-238	ENST00000635997	SLC6A2	P23975	617 aa		14.05	□□□□□ -0.16
NEDD4L-238	ENST00000635997	ITPKB	P27987	946 aa		14.05	□□□□□ -0.16
NEDD4L-238	ENST00000635997	YAP1	P46937	504 aa	Known RBP	14.05	□□□□□ -0.16
NEDD4L-238	ENST00000635997	DEF8	Q6ZN54	512 aa		14.05	□□□□□ -0.16
NEDD4L-238	ENST00000635997	GPR141	Q7Z602	305 aa		14.05	□□□□□ -0.16
NEDD4L-238	ENST00000635997	TDRP	Q86YL5	185 aa		14.05	□□□□□ -0.16
NEDD4L-238	ENST00000635997	NELL1	Q92832	810 aa		14.05	□□□□□ -0.16
NEDD4L-238	ENST00000635997	STRADB	Q9C0K7	418 aa		14.05	□□□□□ -0.16
NEDD4L-238	ENST00000635997	NDUFA13	Q9P0J0	144 aa		14.05	□□□□□ -0.16
NEDD4L-238	ENST00000635997	OR1I1	O60431	355 aa		14.05	□□□□□ -0.16
NEDD4L-238	ENST00000635997	FAM20B	O75063	409 aa		14.05	□□□□□ -0.16
NEDD4L-238	ENST00000635997	TULP3	O75386	442 aa		14.05	□□□□□ -0.16
NEDD4L-238	ENST00000635997	OXTR	P30559	389 aa		14.05	□□□□□ -0.16
NEDD4L-238	ENST00000635997	MAPK12	P53778	367 aa		14.05	□□□□□ -0.16
NEDD4L-238	ENST00000635997	RALGPS1	Q5JS13	557 aa		14.05	□□□□□ -0.16
NEDD4L-238	ENST00000635997	SPPL2C	Q8IUH8	684 aa		14.05	□□□□□ -0.16
NEDD4L-238	ENST00000635997	PARP8	Q8N3A8	854 aa		14.05	□□□□□ -0.16
NEDD4L-238	ENST00000635997	OR4A15	Q8NGL6	344 aa		14.05	□□□□□ -0.16
NEDD4L-238	ENST00000635997	RAPGEFL1	Q9UHV5	662 aa		14.05	□□□□□ -0.16
NEDD4L-238	ENST00000635997	POLR1D	Q9Y2S0	133 aa		14.05	□□□□□ -0.16
NEDD4L-238	ENST00000635997	SAMHD1	Q9Y3Z3	626 aa	Known RBP	14.05	□□□□□ -0.16

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms