RNA–Protein interactions for RNA: ENST00000627371.1

PTCD3-220, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5 BASIC

Gene PTCD3, Length 210 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-220ENST00000627371 ABRQ12979 859 aa19.75■□□□□ 0.75
PTCD3-220ENST00000627371 KYNUQ16719 465 aa19.75■□□□□ 0.75
PTCD3-220ENST00000627371 KBTBD12Q3ZCT8 623 aa19.75■□□□□ 0.75
PTCD3-220ENST00000627371 HECTD2Q5U5R9 776 aa19.75■□□□□ 0.75
PTCD3-220ENST00000627371 KLHL35Q6PF15 583 aa19.75■□□□□ 0.75
PTCD3-220ENST00000627371 PLXDC1Q8IUK5 500 aa19.75■□□□□ 0.75
PTCD3-220ENST00000627371 GPATCH11Q8N954 259 aa19.75■□□□□ 0.75
PTCD3-220ENST00000627371 OR52E1Q8NGJ3 308 aa19.75■□□□□ 0.75
PTCD3-220ENST00000627371 INPP5DQ92835 1189 aa19.75■□□□□ 0.75
PTCD3-220ENST00000627371 ATXN7L3BQ96GX2 97 aa19.75■□□□□ 0.75
PTCD3-220ENST00000627371 LIN37Q96GY3 246 aaPredicted RBP19.75■□□□□ 0.75
PTCD3-220ENST00000627371 CPNE1Q99829 537 aa19.75■□□□□ 0.75
PTCD3-220ENST00000627371 RAB33BQ9H082 229 aa19.75■□□□□ 0.75
PTCD3-220ENST00000627371 SEMA6CQ9H3T2 930 aa19.75■□□□□ 0.75
PTCD3-220ENST00000627371 RHOJQ9H4E5 214 aa19.75■□□□□ 0.75
PTCD3-220ENST00000627371 TFB2MQ9H5Q4 396 aaKnown RBP19.75■□□□□ 0.75
PTCD3-220ENST00000627371 TMEM9Q9P0T7 183 aa19.75■□□□□ 0.75
PTCD3-220ENST00000627371 POLG2Q9UHN1 485 aa19.75■□□□□ 0.75
PTCD3-220ENST00000627371 TRMT6Q9UJA5 497 aaKnown RBP19.75■□□□□ 0.75
PTCD3-220ENST00000627371 ASPMQ8IZT6 3477 aa19.75■□□□□ 0.75
PTCD3-220ENST00000627371 EIF3FO00303 357 aaPredicted RBP19.74■□□□□ 0.75
PTCD3-220ENST00000627371 SLU7O95391 586 aaKnown RBP19.74■□□□□ 0.75
PTCD3-220ENST00000627371 CBSLP0DN79 551 aa19.74■□□□□ 0.75
PTCD3-220ENST00000627371 ENO3P13929 434 aaPredicted RBP19.74■□□□□ 0.75
PTCD3-220ENST00000627371 PHBP35232 272 aa19.74■□□□□ 0.75
PTCD3-220ENST00000627371 CBSP35520 551 aa19.74■□□□□ 0.75
PTCD3-220ENST00000627371 SKIV2L2P42285 1042 aaKnown RBP19.74■□□□□ 0.75
PTCD3-220ENST00000627371 CDKN2DP55273 166 aa19.74■□□□□ 0.75
PTCD3-220ENST00000627371 PRKG2Q13237 762 aa19.74■□□□□ 0.75
PTCD3-220ENST00000627371 NAB1Q13506 487 aa19.74■□□□□ 0.75
PTCD3-220ENST00000627371 SLMAPQ14BN4 828 aa19.74■□□□□ 0.75
PTCD3-220ENST00000627371 NEK10Q6ZWH5 1172 aa19.74■□□□□ 0.75
PTCD3-220ENST00000627371 DCUN1D3Q8IWE4 304 aa19.74■□□□□ 0.75
PTCD3-220ENST00000627371 EIF1ADQ8N9N8 165 aaKnown RBP19.74■□□□□ 0.75
PTCD3-220ENST00000627371 CFAP61Q8NHU2 1237 aa19.74■□□□□ 0.75
PTCD3-220ENST00000627371 SKA2Q8WVK7 121 aaPredicted RBP19.74■□□□□ 0.75
PTCD3-220ENST00000627371 LCN9Q8WX39 176 aa19.74■□□□□ 0.75
PTCD3-220ENST00000627371 CCDC74BQ96LY2 380 aa19.74■□□□□ 0.75
PTCD3-220ENST00000627371 FOPNLQ96NB1 174 aa19.74■□□□□ 0.75
PTCD3-220ENST00000627371 STRADBQ9C0K7 418 aa19.74■□□□□ 0.75
PTCD3-220ENST00000627371 PDP2Q9P2J9 529 aa19.74■□□□□ 0.75
PTCD3-220ENST00000627371 TXNDC16Q9P2K2 825 aa19.74■□□□□ 0.75
PTCD3-220ENST00000627371 VWA7Q9Y334 891 aa19.74■□□□□ 0.75
PTCD3-220ENST00000627371 NFS1Q9Y697 457 aa19.74■□□□□ 0.75
PTCD3-220ENST00000627371 ANKRD12Q6UB98 2062 aa19.74■□□□□ 0.75
PTCD3-220ENST00000627371 ADAMTS20P59510 1910 aa19.73■□□□□ 0.75
PTCD3-220ENST00000627371 OR5K3A6NET4 321 aa19.73■□□□□ 0.75
PTCD3-220ENST00000627371 MATN4O95460 622 aa19.73■□□□□ 0.75
PTCD3-220ENST00000627371 C9P02748 559 aa19.73■□□□□ 0.75
PTCD3-220ENST00000627371 FDXRP22570 491 aa19.73■□□□□ 0.75
PTCD3-220ENST00000627371 GP5P40197 560 aa19.73■□□□□ 0.75
PTCD3-220ENST00000627371 GFERP55789 205 aa19.73■□□□□ 0.75
PTCD3-220ENST00000627371 TUBB4BP68371 445 aa19.73■□□□□ 0.75
PTCD3-220ENST00000627371 TRA2AQ13595 282 aaKnown RBP eCLIP19.73■□□□□ 0.75
PTCD3-220ENST00000627371 KLHL38Q2WGJ6 581 aa19.73■□□□□ 0.75
PTCD3-220ENST00000627371 PHF19Q5T6S3 580 aa19.73■□□□□ 0.75
PTCD3-220ENST00000627371 OOSP2Q86WS3 158 aa19.73■□□□□ 0.75
PTCD3-220ENST00000627371 CTAGE3PQ8IX95 158 aa19.73■□□□□ 0.75
PTCD3-220ENST00000627371 CPNE9Q8IYJ1 553 aa19.73■□□□□ 0.75
PTCD3-220ENST00000627371 VPS39Q96JC1 886 aa19.73■□□□□ 0.75
PTCD3-220ENST00000627371 FUT8Q9BYC5 575 aa19.73■□□□□ 0.75
PTCD3-220ENST00000627371 SRMSQ9H3Y6 488 aa19.73■□□□□ 0.75
PTCD3-220ENST00000627371 EPHA6Q9UF33 1036 aa19.73■□□□□ 0.75
PTCD3-220ENST00000627371 TSR3Q9UJK0 312 aaKnown RBP19.73■□□□□ 0.75
PTCD3-220ENST00000627371 RUVBL2Q9Y230 463 aaKnown RBP19.73■□□□□ 0.75
PTCD3-220ENST00000627371 TDRKHQ9Y2W6 561 aaKnown RBP19.73■□□□□ 0.75
PTCD3-220ENST00000627371 SNRNP200O75643 2136 aaKnown RBP19.72■□□□□ 0.75
PTCD3-220ENST00000627371 CCDC187A0A096LP49 1063 aa19.72■□□□□ 0.75
PTCD3-220ENST00000627371 FAM95CA0A1B0GW59 222 aa19.72■□□□□ 0.75
PTCD3-220ENST00000627371 CAPN5O15484 640 aaPredicted RBP19.72■□□□□ 0.75
PTCD3-220ENST00000627371 KDM1AO60341 852 aa19.72■□□□□ 0.75
PTCD3-220ENST00000627371 C1orf105O95561 183 aa19.72■□□□□ 0.75
PTCD3-220ENST00000627371 MPC1LP0DKB6 136 aa19.72■□□□□ 0.75
PTCD3-220ENST00000627371 MCM3P25205 808 aa19.72■□□□□ 0.75
PTCD3-220ENST00000627371 MPSTP25325 297 aa19.72■□□□□ 0.75
PTCD3-220ENST00000627371 TNFRSF8P28908 595 aa19.72■□□□□ 0.75
PTCD3-220ENST00000627371 EIF3IQ13347 325 aaKnown RBP19.72■□□□□ 0.75
PTCD3-220ENST00000627371 UBAP2Q5T6F2 1119 aaKnown RBP19.72■□□□□ 0.75
PTCD3-220ENST00000627371 LRRC8EQ6NSJ5 796 aa19.72■□□□□ 0.75
PTCD3-220ENST00000627371 PPM1NQ8N819 430 aa19.72■□□□□ 0.75
PTCD3-220ENST00000627371 OR4E2Q8NGC2 313 aa19.72■□□□□ 0.75
PTCD3-220ENST00000627371 ELMO2Q96JJ3 720 aa19.72■□□□□ 0.75
PTCD3-220ENST00000627371 RBBP8Q99708 897 aa19.72■□□□□ 0.75
PTCD3-220ENST00000627371 OLFM1Q99784 485 aa19.72■□□□□ 0.75
PTCD3-220ENST00000627371 NRSN2Q9GZP1 204 aa19.72■□□□□ 0.75
PTCD3-220ENST00000627371 ICKQ9UPZ9 632 aa19.72■□□□□ 0.75
PTCD3-220ENST00000627371 OR6C74A6NCV1 312 aa19.71■□□□□ 0.75
PTCD3-220ENST00000627371 HGSO14964 777 aaPredicted RBP19.71■□□□□ 0.75
PTCD3-220ENST00000627371 ACSL3O95573 720 aa19.71■□□□□ 0.75
PTCD3-220ENST00000627371 TPBGLP0DKB5 382 aa19.71■□□□□ 0.75
PTCD3-220ENST00000627371 SHMT2P34897 504 aa19.71■□□□□ 0.75
PTCD3-220ENST00000627371 CCNFP41002 786 aa19.71■□□□□ 0.75
PTCD3-220ENST00000627371 BDKRB1P46663 353 aa19.71■□□□□ 0.75
PTCD3-220ENST00000627371 RGS4P49798 205 aa19.71■□□□□ 0.75
PTCD3-220ENST00000627371 PDAP1Q13442 181 aaKnown RBP19.71■□□□□ 0.75
PTCD3-220ENST00000627371 EFTUD2Q15029 972 aaKnown RBP eCLIP19.71■□□□□ 0.758e-7■■■■■ 34.2
PTCD3-220ENST00000627371 PAQR3Q6TCH7 311 aa19.71■□□□□ 0.75
PTCD3-220ENST00000627371 AMIGO1Q86WK6 493 aa19.71■□□□□ 0.75
PTCD3-220ENST00000627371 SPNS2Q8IVW8 549 aa19.71■□□□□ 0.75
PTCD3-220ENST00000627371 RCBTB1Q8NDN9 531 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms