RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 MTG2Q9H4K7 406 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 ACTR8Q9H981 624 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 DNAJC11Q9NVH1 559 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 A0A1W2PP18 115 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 FAM234BA2RU67 622 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 NPIPB8E9PQR5 432 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 SGTAO43765 313 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 HLA-EP13747 358 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 MAPK1P28482 360 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 PRDX3P30048 256 aaKnown RBP15.99■□□□□ 0.15
LDB3-208ENST00000623007 PTDSS1P48651 473 aaKnown RBP15.99■□□□□ 0.15
LDB3-208ENST00000623007 RPA4Q13156 261 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 CAMK2GQ13555 558 aaPredicted RBP15.99■□□□□ 0.15
LDB3-208ENST00000623007 RCAN2Q14206 197 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 NR6A1Q15406 480 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 ZNF423Q2M1K9 1284 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 LIPJQ5W064 366 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 RAET1GQ6H3X3 334 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 SDE2Q6IQ49 451 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 ADAMTSL4Q6UY14 1074 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 TRMT11Q7Z4G4 463 aaKnown RBP15.99■□□□□ 0.15
LDB3-208ENST00000623007 RASGEF1AQ8N9B8 481 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 L3MBTL4Q8NA19 623 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 ZBTB18Q99592 522 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 WRAP53Q9BUR4 548 aaKnown RBP15.99■□□□□ 0.15
LDB3-208ENST00000623007 RSPH9Q9H1X1 276 aaPredicted RBP15.99■□□□□ 0.15
LDB3-208ENST00000623007 S1PR5Q9H228 398 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 S100A14Q9HCY8 104 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 LEF1Q9UJU2 399 aaPredicted RBP15.99■□□□□ 0.15
LDB3-208ENST00000623007 TMED5Q9Y3A6 229 aa15.99■□□□□ 0.15
LDB3-208ENST00000623007 MYO7AQ13402 2215 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 EPOPA6NHQ4 379 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 H0Y3Z8 333 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 KRT36O76013 467 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 BMP1P13497 986 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 GNPDA1P46926 289 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 FLOT2Q14254 428 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 GRB7Q14451 532 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 IMPG1Q17R60 797 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 CACHD1Q5VU97 1274 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 ICE2Q659A1 982 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 TMEM220Q6QAJ8 160 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 PAOXQ6QHF9 649 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 HPS6Q86YV9 775 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 MMAAQ8IVH4 418 aaKnown RBP15.98■□□□□ 0.15
LDB3-208ENST00000623007 DNAJB8Q8NHS0 232 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 USP7Q93009 1102 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 ESAMQ96AP7 390 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 SPDL1Q96EA4 605 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 RSRC1Q96IZ7 334 aaKnown RBP15.98■□□□□ 0.15
LDB3-208ENST00000623007 MYADMQ96S97 322 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 NPAS2Q99743 824 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 FBRSL1Q9HCM7 1045 aaKnown RBP15.98■□□□□ 0.15
LDB3-208ENST00000623007 GPRC5BQ9NZH0 403 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 SCML1Q9UN30 329 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 ASB1Q9Y576 335 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 FADS3Q9Y5Q0 445 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 STON1Q9Y6Q2 735 aa15.98■□□□□ 0.15
LDB3-208ENST00000623007 COL4A3Q01955 1670 aa15.97■□□□□ 0.15
LDB3-208ENST00000623007 OR2AG2A6NM03 316 aa15.97■□□□□ 0.15
LDB3-208ENST00000623007 LSM1O15116 133 aaKnown RBP15.97■□□□□ 0.15
LDB3-208ENST00000623007 CFLARO15519 480 aa15.97■□□□□ 0.15
LDB3-208ENST00000623007 DNAJA2O60884 412 aa15.97■□□□□ 0.15
LDB3-208ENST00000623007 BCAS2O75934 225 aaPredicted RBP15.97■□□□□ 0.15
LDB3-208ENST00000623007 ANPEPP15144 967 aa15.97■□□□□ 0.15
LDB3-208ENST00000623007 PRPH2P23942 346 aa15.97■□□□□ 0.15
LDB3-208ENST00000623007 C8orf82Q6P1X6 216 aaPredicted RBP15.97■□□□□ 0.15
LDB3-208ENST00000623007 LRRC74BQ6ZQY2 392 aa15.97■□□□□ 0.15
LDB3-208ENST00000623007 Q6ZSR9 355 aa15.97■□□□□ 0.15
LDB3-208ENST00000623007 KBTBD6Q86V97 674 aa15.97■□□□□ 0.15
LDB3-208ENST00000623007 SPNS2Q8IVW8 549 aa15.97■□□□□ 0.15
LDB3-208ENST00000623007 CHPFQ8IZ52 775 aa15.97■□□□□ 0.15
LDB3-208ENST00000623007 GOLM1Q8NBJ4 401 aa15.97■□□□□ 0.15
LDB3-208ENST00000623007 HMGCLL1Q8TB92 370 aa15.97■□□□□ 0.15
LDB3-208ENST00000623007 HIC2Q96JB3 615 aa15.97■□□□□ 0.15
LDB3-208ENST00000623007 ACOX2Q99424 681 aa15.97■□□□□ 0.15
LDB3-208ENST00000623007 TRIM15Q9C019 465 aa15.97■□□□□ 0.15
LDB3-208ENST00000623007 TRPV5Q9NQA5 729 aa15.97■□□□□ 0.15
LDB3-208ENST00000623007 ADA2Q9NZK5 511 aa15.97■□□□□ 0.15
LDB3-208ENST00000623007 C6orf203Q9P0P8 240 aaPredicted RBP15.97■□□□□ 0.15
LDB3-208ENST00000623007 NKX1-2Q9UD57 310 aaPredicted RBP15.97■□□□□ 0.15
LDB3-208ENST00000623007 TSR3Q9UJK0 312 aaKnown RBP15.97■□□□□ 0.15
LDB3-208ENST00000623007 MAPRE3Q9UPY8 281 aa15.97■□□□□ 0.15
LDB3-208ENST00000623007 AP3M1Q9Y2T2 418 aa15.97■□□□□ 0.15
LDB3-208ENST00000623007 LRRC42Q9Y546 428 aa15.97■□□□□ 0.15
LDB3-208ENST00000623007 PCDHGA7Q9Y5G6 932 aa15.97■□□□□ 0.15
LDB3-208ENST00000623007 A0A1B0GTL3 188 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 CCDC154A6NI56 674 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 H3BM21 787 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 NR5A2O00482 541 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 SPINT1O43278 529 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 TBX10O75333 385 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 EEDO75530 441 aaKnown RBP15.96■□□□□ 0.15
LDB3-208ENST00000623007 RSL1D1O76021 490 aaKnown RBP15.96■□□□□ 0.15
LDB3-208ENST00000623007 PDE5AO76074 875 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 JAK1P23458 1154 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 P2RY2P41231 377 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 TRIM25Q14258 630 aaKnown RBP15.96■□□□□ 0.15
LDB3-208ENST00000623007 GRM2Q14416 872 aa15.96■□□□□ 0.15
LDB3-208ENST00000623007 STARD3Q14849 445 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms