RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 PCMTD2Q9NV79 361 aa19.36■□□□□ 0.69
PDLIM2-221ENST00000622702 FTSJ1Q9UET6 329 aa19.36■□□□□ 0.69
PDLIM2-221ENST00000622702 GOLGA8RI6L899 631 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 TRIM38O00635 465 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 KLHL2O95198 593 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 ALPPL2P10696 532 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 CD1DP15813 335 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 KRT4P19013 534 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 SIM1P81133 766 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 FAM83EQ2M2I3 478 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 DEFB133Q30KQ1 61 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 AGBL2Q5U5Z8 902 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 OGFOD3Q6PK18 319 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 UNC5DQ6UXZ4 953 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 NAGSQ8N159 534 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 OR4C6Q8NH72 309 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 ZDHHC1Q8WTX9 485 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 ASB11Q8WXH4 323 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 TFGQ92734 400 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 INSM2Q96T92 566 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 NMRAL1Q9HBL8 299 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 NLGN3Q9NZ94 848 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 SCHIP1Q9P0W5 487 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 ACTL7BQ9Y614 415 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 SPEGQ15772 3267 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 COL5A1P20908 1838 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 KIR2DS5A0A0G2JLQ3 304 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 A0A0G2JNG1 304 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 KIR2DS3K7RE56 304 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 SIGLEC6O43699 453 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 LDOC1O95751 146 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 ABRQ12979 859 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 KIR2DS5Q14953 304 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 RPE65Q16518 533 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 TSNAXIP1Q2TAA8 658 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 C6orf132Q5T0Z8 1188 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 C17orf82Q86X59 251 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 PLD6Q8N2A8 252 aaKnown RBP19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 SPATA6LQ8N4H0 392 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 SKA2Q8WVK7 121 aaPredicted RBP19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 NXNL1Q96CM4 212 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 TLCD1Q96CP7 247 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 CNDP2Q96KP4 475 aaKnown RBP19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 C12orf66Q96MD2 445 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 FOPNLQ96NB1 174 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 GPR78Q96P69 363 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 DUSP23Q9BVJ7 150 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 MKS1Q9NXB0 559 aa19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 TSR3Q9UJK0 312 aaKnown RBP19.35■□□□□ 0.69
PDLIM2-221ENST00000622702 GOLGA4Q13439 2230 aaKnown RBP19.34■□□□□ 0.69
PDLIM2-221ENST00000622702 CCDC189A1A4V9 331 aa19.34■□□□□ 0.69
PDLIM2-221ENST00000622702 OR52A4PA6NMU1 304 aa19.34■□□□□ 0.69
PDLIM2-221ENST00000622702 GFYI3L273 518 aa19.34■□□□□ 0.69
PDLIM2-221ENST00000622702 PSIP1O75475 530 aaKnown RBP19.34■□□□□ 0.69
PDLIM2-221ENST00000622702 C8GP07360 202 aa19.34■□□□□ 0.69
PDLIM2-221ENST00000622702 GSTA1P08263 222 aa19.34■□□□□ 0.69
PDLIM2-221ENST00000622702 MTHFD1P11586 935 aaKnown RBP19.34■□□□□ 0.69
PDLIM2-221ENST00000622702 SP140Q13342 867 aa19.34■□□□□ 0.69
PDLIM2-221ENST00000622702 GLRX5Q86SX6 157 aa19.34■□□□□ 0.69
PDLIM2-221ENST00000622702 EXOC3L1Q86VI1 746 aa19.34■□□□□ 0.69
PDLIM2-221ENST00000622702 C4orf33Q8N1A6 199 aa19.34■□□□□ 0.69
PDLIM2-221ENST00000622702 SFRP1Q8N474 314 aa19.34■□□□□ 0.69
PDLIM2-221ENST00000622702 GOLGA6L1Q8N7Z2 621 aa19.34■□□□□ 0.69
PDLIM2-221ENST00000622702 ARL8AQ96BM9 186 aa19.34■□□□□ 0.69
PDLIM2-221ENST00000622702 ALKBH8Q96BT7 664 aaKnown RBP19.34■□□□□ 0.69
PDLIM2-221ENST00000622702 SMC6Q96SB8 1091 aa19.34■□□□□ 0.69
PDLIM2-221ENST00000622702 ZNF624Q9P2J8 865 aaPredicted RBP19.34■□□□□ 0.69
PDLIM2-221ENST00000622702 DCDC2Q9UHG0 476 aa19.34■□□□□ 0.69
PDLIM2-221ENST00000622702 RUVBL2Q9Y230 463 aaKnown RBP19.34■□□□□ 0.69
PDLIM2-221ENST00000622702 HEBP2Q9Y5Z4 205 aa19.34■□□□□ 0.69
PDLIM2-221ENST00000622702 CACNA1AO00555 2505 aa19.34■□□□□ 0.69
PDLIM2-221ENST00000622702 B4DGG1 531 aa19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 BTN3A1O00481 513 aa19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 SLC16A5O15375 505 aa19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 TNFSF14O43557 240 aa19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 ZBTB14O43829 449 aa19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 NOBOXO60393 691 aa19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 XRCC1P18887 633 aaPredicted RBP19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 CRHR1P34998 444 aa19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 ACAP2Q15057 778 aa19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 KLC3Q6P597 504 aa19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 ADAMTSL2Q86TH1 951 aa19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 ISCA2Q86U28 154 aa19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 BANPQ8N9N5 519 aa19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 GPR156Q8NFN8 814 aa19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 SLC37A2Q8TED4 501 aa19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 PATE1Q8WXA2 126 aa19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 KIAA1191Q96A73 305 aa19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 TSNARE1Q96NA8 513 aa19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 SLC12A9Q9BXP2 914 aa19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 TFB2MQ9H5Q4 396 aaKnown RBP19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 MVB12BQ9H7P6 319 aa19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 SSU72Q9NP77 194 aaKnown RBP19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 IMP3Q9NV31 184 aaKnown RBP19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 IKZF3Q9UKT9 509 aa19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 NOVA2Q9UNW9 492 aaKnown RBP19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 ASF1AQ9Y294 204 aa19.33■□□□□ 0.68
PDLIM2-221ENST00000622702 GLRA3O75311 464 aa19.32■□□□□ 0.68
PDLIM2-221ENST00000622702 TOP3BO95985 862 aaKnown RBP19.32■□□□□ 0.68
PDLIM2-221ENST00000622702 CATP04040 527 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms