RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 GDF6Q6KF10 455 aaPredicted RBP12.24□□□□□ -0.45
LITAF-221ENST00000622633 ALKBH2Q6NS38 261 aa12.24□□□□□ -0.45
LITAF-221ENST00000622633 HMBOX1Q6NT76 420 aa12.24□□□□□ -0.45
LITAF-221ENST00000622633 ISCA2Q86U28 154 aa12.24□□□□□ -0.45
LITAF-221ENST00000622633 SPATA2LQ8IUW3 424 aaPredicted RBP12.24□□□□□ -0.45
LITAF-221ENST00000622633 RYBPQ8N488 228 aaPredicted RBP12.24□□□□□ -0.45
LITAF-221ENST00000622633 OR8K3Q8NH51 312 aa12.24□□□□□ -0.45
LITAF-221ENST00000622633 TESCQ96BS2 214 aa12.24□□□□□ -0.45
LITAF-221ENST00000622633 TRAF4Q9BUZ4 470 aaPredicted RBP12.24□□□□□ -0.45
LITAF-221ENST00000622633 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.24□□□□□ -0.455e-7■■□□□ 11.6
LITAF-221ENST00000622633 ARNT2Q9HBZ2 717 aa12.24□□□□□ -0.45
LITAF-221ENST00000622633 MRPL40Q9NQ50 206 aaKnown RBP12.24□□□□□ -0.45
LITAF-221ENST00000622633 PRDM8Q9NQV8 689 aa12.24□□□□□ -0.45
LITAF-221ENST00000622633 CD300AQ9UGN4 299 aa12.24□□□□□ -0.45
LITAF-221ENST00000622633 SARDHQ9UL12 918 aa12.24□□□□□ -0.45
LITAF-221ENST00000622633 MRPS7Q9Y2R9 242 aaKnown RBP12.24□□□□□ -0.45
LITAF-221ENST00000622633 PMF1-BGLAPU3KQ54 211 aa12.24□□□□□ -0.45
LITAF-221ENST00000622633 TANC1Q9C0D5 1861 aa12.24□□□□□ -0.45
LITAF-221ENST00000622633 PPP6CO00743 305 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 TNFRSF10BO14763 440 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 S1PR4O95977 384 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 CYP11A1P05108 521 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 MTHFD1P11586 935 aaKnown RBP12.23□□□□□ -0.45
LITAF-221ENST00000622633 DDCP20711 480 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 HTR7P34969 479 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 HLCSP50747 726 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 PLA2G16P53816 162 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 C4orf46Q504U0 113 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 UNC50Q53HI1 259 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 CRTC3Q6UUV7 619 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 CXCL17Q6UXB2 119 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 LARP4Q71RC2 724 aaKnown RBP eCLIP12.23□□□□□ -0.452e-12■■■□□ 15.7
LITAF-221ENST00000622633 SLC22A9Q8IVM8 553 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 FUNDC1Q8IVP5 155 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 CDH26Q8IXH8 852 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 TAGAPQ8N103 731 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 OR4M2Q8NGB6 313 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 OR4M1Q8NGD0 313 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 OR52K2Q8NGK3 314 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 RHOXF1Q8NHV9 184 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 ST8SIA2Q92186 375 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 ABCG4Q9H172 646 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 NOL11Q9H8H0 719 aaKnown RBP12.23□□□□□ -0.45
LITAF-221ENST00000622633 IL1RL2Q9HB29 575 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 ATP13A1Q9HD20 1204 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 GPRC5BQ9NZH0 403 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 GIMAP2Q9UG22 337 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 PTGDR2Q9Y5Y4 395 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 TTC3P53804 2025 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 MUSKO15146 869 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 GJB3O75712 270 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 SERPINI2O75830 405 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 CNTN5O94779 1100 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 PTTG1O95997 202 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 MMP2P08253 660 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 ZNF250P15622 560 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 CYP2A7P20853 494 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 MAGP20916 626 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 CD52P31358 61 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 RENBPP51606 427 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 SLC7A2P52569 658 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 PTPRCAPQ14761 206 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 SLC14A2Q15849 920 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 ZNF678Q5SXM1 525 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 MARC1Q5VT66 337 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 GARNL3Q5VVW2 1013 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 SPRYD7Q5W111 196 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 VN1R5Q7Z5H4 357 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 KRT77Q7Z794 578 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 MRPL10Q7Z7H8 261 aaKnown RBP12.23□□□□□ -0.45
LITAF-221ENST00000622633 THEM5Q8N1Q8 247 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 FAM110BQ8TC76 370 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 PTERQ96BW5 349 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 LRCH3Q96II8 777 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 RPRD1AQ96P16 312 aaPredicted RBP12.23□□□□□ -0.45
LITAF-221ENST00000622633 SLC25A23Q9BV35 468 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 ADI1Q9BV57 179 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 MIR1-1HGQ9H1L0 117 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 SLC39A1Q9NY26 324 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 TMEM181Q9P2C4 612 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 KLHL42Q9P2K6 505 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 KLF2Q9Y5W3 355 aaPredicted RBP12.23□□□□□ -0.45
LITAF-221ENST00000622633 SCN4AP35499 1836 aa12.23□□□□□ -0.45
LITAF-221ENST00000622633 TCRBV3S1A0A5B6 114 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 LRRC14BA6NHZ5 514 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 C9JVG2 144 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 TIPRLO75663 272 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 SRP72O76094 671 aaKnown RBP12.22□□□□□ -0.45
LITAF-221ENST00000622633 TRIM16O95361 564 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 ALDOCP09972 364 aaKnown RBP12.22□□□□□ -0.45
LITAF-221ENST00000622633 EEF1B2P24534 225 aaKnown RBP12.22□□□□□ -0.45
LITAF-221ENST00000622633 SLC7A1P30825 629 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 SLC36A3Q495N2 470 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 ALFQ53S48 1182 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 GNASQ5JWF2 1037 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 SIRPB2Q5JXA9 342 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 SAMD4BQ5PRF9 694 aaKnown RBP12.22□□□□□ -0.45
LITAF-221ENST00000622633 NOXA1Q86UR1 476 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 AMIGO1Q86WK6 493 aa12.22□□□□□ -0.45
LITAF-221ENST00000622633 MFSD2AQ8NA29 543 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms