RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 PHF21BQ96EK2 531 aa17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 CCT8L2Q96SF2 557 aa17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 GSDMCQ9BYG8 508 aa17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 ZDHHC5Q9C0B5 715 aa17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 PRDM8Q9NQV8 689 aa17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 OXSMQ9NWU1 459 aa17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 NUDT4Q9NZJ9 180 aa17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 PDE10AQ9Y233 779 aa17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 WDR37Q9Y2I8 494 aa17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 TMEM131Q92545 1883 aa17.39■□□□□ 0.37
PTCHD3-202ENST00000622555 ARHGEF33A8MVX0 844 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 FFAR2O15552 330 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 GUCA1CO95843 209 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 HIST1H2AGP0C0S8 130 aaPredicted RBP17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 HIST1H2ADP20671 130 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 BGNP21810 368 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 BDKRB1P46663 353 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 RPIAP49247 311 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 SEC24CP53992 1094 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 PDK4Q16654 411 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 PFKFB4Q16877 469 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 PRRT3Q5FWE3 981 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 UNC5DQ6UXZ4 953 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 NRROSQ86YC3 692 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 RASGRP3Q8IV61 690 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 SLC22A9Q8IVM8 553 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 FBXO39Q8N4B4 442 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 GPBAR1Q8TDU6 330 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 TFGQ92734 400 aaPredicted RBP17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 CCDC126Q96EE4 140 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 HIST1H2AHQ96KK5 128 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 HIST1H2AJQ99878 128 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 H2AFJQ9BTM1 129 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 RDH14Q9HBH5 336 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 NCKIPSDQ9NZQ3 722 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 SIRPGQ9P1W8 387 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 TBC1D29Q9UFV1 150 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 ASF1AQ9Y294 204 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 CFAP20Q9Y6A4 193 aaKnown RBP17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 TRIM13O60858 407 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 IPO13O94829 963 aaKnown RBP17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 C1orf61Q13536 156 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 CHI3L2Q15782 390 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 LPAL2Q16609 132 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 UAP1L1Q3KQV9 507 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 LIPMQ5VYY2 423 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 CAPRIN2Q6IMN6 1127 aaKnown RBP17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 TAF8Q7Z7C8 310 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 TRIM42Q8IWZ5 723 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 PTGR2Q8N8N7 351 aaPredicted RBP17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 MAGEB18Q96M61 343 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 C12orf66Q96MD2 445 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 EGFL8Q99944 293 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 LRRC61Q9BV99 259 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 ARL15Q9NXU5 204 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 TMCO1Q9UM00 188 aa17.38■□□□□ 0.37
PTCHD3-202ENST00000622555 NDUFAB1O14561 156 aa17.37■□□□□ 0.37
PTCHD3-202ENST00000622555 C1orf105O95561 183 aa17.37■□□□□ 0.37
PTCHD3-202ENST00000622555 CELA2BP08218 269 aaPredicted RBP17.37■□□□□ 0.37
PTCHD3-202ENST00000622555 FGF3P11487 239 aaPredicted RBP17.37■□□□□ 0.37
PTCHD3-202ENST00000622555 PRKAA2P54646 552 aa17.37■□□□□ 0.37
PTCHD3-202ENST00000622555 NFKB2Q00653 900 aa17.37■□□□□ 0.37
PTCHD3-202ENST00000622555 ASPHQ12797 758 aa17.37■□□□□ 0.37
PTCHD3-202ENST00000622555 KIF19Q2TAC6 998 aa17.37■□□□□ 0.37
PTCHD3-202ENST00000622555 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.37■□□□□ 0.37
PTCHD3-202ENST00000622555 PRAMEF14Q5SWL7 426 aa17.37■□□□□ 0.37
PTCHD3-202ENST00000622555 MBOAT1Q6ZNC8 495 aa17.37■□□□□ 0.37
PTCHD3-202ENST00000622555 ZCCHC23Q6ZST2 131 aa17.37■□□□□ 0.37
PTCHD3-202ENST00000622555 RAB44Q7Z6P3 723 aaPredicted RBP17.37■□□□□ 0.37
PTCHD3-202ENST00000622555 PHC3Q8NDX5 983 aa17.37■□□□□ 0.37
PTCHD3-202ENST00000622555 LRRC8CQ8TDW0 803 aa17.37■□□□□ 0.37
PTCHD3-202ENST00000622555 ZNF473Q8WTR7 871 aaKnown RBP17.37■□□□□ 0.37
PTCHD3-202ENST00000622555 INSM2Q96T92 566 aaPredicted RBP17.37■□□□□ 0.37
PTCHD3-202ENST00000622555 MANSC1Q9H8J5 431 aa17.37■□□□□ 0.37
PTCHD3-202ENST00000622555 KLK8O60259 260 aa17.36■□□□□ 0.37
PTCHD3-202ENST00000622555 RPN2P04844 631 aa17.36■□□□□ 0.37
PTCHD3-202ENST00000622555 HALP42357 657 aa17.36■□□□□ 0.37
PTCHD3-202ENST00000622555 DPP6P42658 865 aa17.36■□□□□ 0.37
PTCHD3-202ENST00000622555 ALDH18A1P54886 795 aaKnown RBP17.36■□□□□ 0.37
PTCHD3-202ENST00000622555 AP1S2P56377 157 aa17.36■□□□□ 0.37
PTCHD3-202ENST00000622555 CLCA4Q14CN2 919 aa17.36■□□□□ 0.37
PTCHD3-202ENST00000622555 PEAR1Q5VY43 1037 aaPredicted RBP17.36■□□□□ 0.37
PTCHD3-202ENST00000622555 WASH2PQ6VEQ5 465 aa17.36■□□□□ 0.37
PTCHD3-202ENST00000622555 OR5AR1Q8NGP9 310 aa17.36■□□□□ 0.37
PTCHD3-202ENST00000622555 ZNF75CPQ92670 426 aaPredicted RBP17.36■□□□□ 0.37
PTCHD3-202ENST00000622555 WASH6PQ9NQA3 447 aa17.36■□□□□ 0.37
PTCHD3-202ENST00000622555 IMP3Q9NV31 184 aaKnown RBP17.36■□□□□ 0.37
PTCHD3-202ENST00000622555 TAAR2Q9P1P5 351 aa17.36■□□□□ 0.37
PTCHD3-202ENST00000622555 SPASTQ9UBP0 616 aa17.36■□□□□ 0.37
PTCHD3-202ENST00000622555 SNX11Q9Y5W9 270 aa17.36■□□□□ 0.37
PTCHD3-202ENST00000622555 R4GN57 208 aa17.36■□□□□ 0.37
PTCHD3-202ENST00000622555 KRT87PA6NCN2 255 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 OR52A4PA6NMU1 304 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 EML2O95834 649 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 CFIP05156 583 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 ANXA5P08758 320 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 HOXD12P35452 270 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 CTSKP43235 329 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 DNAJB13P59910 316 aa17.35■□□□□ 0.37
PTCHD3-202ENST00000622555 HNRNPKP61978 463 aaKnown RBP eCLIP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms