RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 LRRC70Q7Z2Q7 622 aa20.96■□□□□ 0.95
SPAST-204ENST00000621856 RASGRP3Q8IV61 690 aa20.96■□□□□ 0.95
SPAST-204ENST00000621856 RBM15BQ8NDT2 890 aaKnown RBP20.96■□□□□ 0.95
SPAST-204ENST00000621856 LINC00615Q96LM1 132 aaPredicted RBP20.96■□□□□ 0.95
SPAST-204ENST00000621856 SLC32A1Q9H598 525 aa20.96■□□□□ 0.95
SPAST-204ENST00000621856 POLG2Q9UHN1 485 aa20.96■□□□□ 0.95
SPAST-204ENST00000621856 TBC1D3DA0A087WVF3 549 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 TBC1D3IA0A087WXS9 549 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 TBC1D3EA0A087X179 549 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 TBC1D3KA0A087X1G2 549 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 TBC1D3FA6NER0 549 aaPredicted RBP20.95■□□□□ 0.94
SPAST-204ENST00000621856 ARHGEF33A8MVX0 844 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 TBC1D3LB9A6J9 549 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 GSC2O15499 205 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 CAPN1P07384 714 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 TBC1D3HP0C7X1 549 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 THRAP10827 490 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 HMOX2P30519 316 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 GGT5P36269 586 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 INPP5AQ14642 412 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 ZNF658BQ4V348 819 aaPredicted RBP20.95■□□□□ 0.94
SPAST-204ENST00000621856 SLC44A4Q53GD3 710 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 TBC1D3GQ6DHY5 549 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 TBC1D3CQ6IPX1 549 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 SCIMPQ6UWF3 145 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 FAM124AQ86V42 546 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 ZNF547Q8IVP9 402 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 TBC1D3Q8IZP1 549 aaPredicted RBP20.95■□□□□ 0.94
SPAST-204ENST00000621856 SNX31Q8N9S9 440 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 TP53I13Q8NBR0 393 aaPredicted RBP20.95■□□□□ 0.94
SPAST-204ENST00000621856 FBXO27Q8NI29 283 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 HM13Q8TCT9 377 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 C1QTNF7Q9BXJ2 289 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 C1QTNF2Q9BXJ5 285 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 WDR26Q9H7D7 661 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 CD248Q9HCU0 757 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 FZD4Q9ULV1 537 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 DOCK9Q9BZ29 2069 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 C17orf113A0A1B0GUU1 675 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 WDR47O94967 919 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 HGFP14210 728 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 CD72P21854 359 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 BDKRB1P46663 353 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 CCR3P51677 355 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 SFSWAPQ12872 951 aaKnown RBP20.95■□□□□ 0.94
SPAST-204ENST00000621856 CUL3Q13618 768 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 DNAL1Q4LDG9 190 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 CYB5D1Q6P9G0 228 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 KBTBD6Q86V97 674 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 SNX32Q86XE0 403 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 OR2L2Q8NH16 312 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 HLA-CQ95604 372 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 FBXL8Q96CD0 374 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 LGR4Q9BXB1 951 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 TEX101Q9BY14 249 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 SLC17A9Q9BYT1 436 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 PREBQ9HCU5 417 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 GULP1Q9UBP9 304 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 NDRG2Q9UN36 371 aaKnown RBP20.95■□□□□ 0.94
SPAST-204ENST00000621856 PRKAB1Q9Y478 270 aa20.95■□□□□ 0.94
SPAST-204ENST00000621856 KRT87PA6NCN2 255 aa20.94■□□□□ 0.94
SPAST-204ENST00000621856 MGAT4DA6NG13 374 aa20.94■□□□□ 0.94
SPAST-204ENST00000621856 SRFP11831 508 aa20.94■□□□□ 0.94
SPAST-204ENST00000621856 LBPP18428 481 aa20.94■□□□□ 0.94
SPAST-204ENST00000621856 TEAD1P28347 426 aa20.94■□□□□ 0.94
SPAST-204ENST00000621856 STX1BP61266 288 aa20.94■□□□□ 0.94
SPAST-204ENST00000621856 PLOD1Q02809 727 aaPredicted RBP20.94■□□□□ 0.94
SPAST-204ENST00000621856 SMAD2Q15796 467 aaKnown RBP20.94■□□□□ 0.94
SPAST-204ENST00000621856 TMEM259Q4ZIN3 620 aa20.94■□□□□ 0.94
SPAST-204ENST00000621856 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.94■□□□□ 0.94
SPAST-204ENST00000621856 TCHHL1Q5QJ38 904 aaPredicted RBP20.94■□□□□ 0.94
SPAST-204ENST00000621856 USP30Q70CQ3 517 aa20.94■□□□□ 0.94
SPAST-204ENST00000621856 LRRTM4Q86VH4 590 aa20.94■□□□□ 0.94
SPAST-204ENST00000621856 HORMAD1Q86X24 394 aa20.94■□□□□ 0.94
SPAST-204ENST00000621856 ARHGAP24Q8N264 748 aa20.94■□□□□ 0.94
SPAST-204ENST00000621856 FOXJ1Q92949 421 aa20.94■□□□□ 0.94
SPAST-204ENST00000621856 MRGPRX1Q96LB2 322 aa20.94■□□□□ 0.94
SPAST-204ENST00000621856 CCT7Q99832 543 aa20.94■□□□□ 0.94
SPAST-204ENST00000621856 PHPT1Q9NRX4 125 aaPredicted RBP20.94■□□□□ 0.94
SPAST-204ENST00000621856 RIC8BQ9NVN3 520 aa20.94■□□□□ 0.94
SPAST-204ENST00000621856 GIMAP2Q9UG22 337 aa20.94■□□□□ 0.94
SPAST-204ENST00000621856 OR1A2Q9Y585 309 aa20.94■□□□□ 0.94
SPAST-204ENST00000621856 MAT2AP31153 395 aaKnown RBP20.93■□□□□ 0.94
SPAST-204ENST00000621856 SLC6A12P48065 614 aa20.93■□□□□ 0.94
SPAST-204ENST00000621856 TDGQ13569 410 aa20.93■□□□□ 0.94
SPAST-204ENST00000621856 CCINQ13939 588 aa20.93■□□□□ 0.94
SPAST-204ENST00000621856 CYLC2Q14093 348 aaPredicted RBP20.93■□□□□ 0.94
SPAST-204ENST00000621856 GRB7Q14451 532 aa20.93■□□□□ 0.94
SPAST-204ENST00000621856 NFE2L1Q14494 772 aa20.93■□□□□ 0.94
SPAST-204ENST00000621856 HERC3Q15034 1050 aa20.93■□□□□ 0.94
SPAST-204ENST00000621856 PTCHD3Q3KNS1 767 aa20.93■□□□□ 0.94
SPAST-204ENST00000621856 TMEM92Q6UXU6 159 aa20.93■□□□□ 0.94
SPAST-204ENST00000621856 RP9Q8TA86 221 aaKnown RBP20.93■□□□□ 0.94
SPAST-204ENST00000621856 C1orf21Q9H246 121 aa20.93■□□□□ 0.94
SPAST-204ENST00000621856 MMP17Q9ULZ9 603 aa20.93■□□□□ 0.94
SPAST-204ENST00000621856 TCRBV21S2A2A0A5A6 115 aa20.92■□□□□ 0.94
SPAST-204ENST00000621856 LOC730098B7Z3J9 87 aa20.92■□□□□ 0.94
SPAST-204ENST00000621856 CHUKO15111 745 aa20.92■□□□□ 0.94
SPAST-204ENST00000621856 EBLN1P0CF75 366 aa20.92■□□□□ 0.94
SPAST-204ENST00000621856 PGM1P36871 562 aa20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms