RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 FAM110BQ8TC76 370 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 SELENOMQ8WWX9 145 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 KCNJ9Q92806 393 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 FCRL4Q96PJ5 515 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 MRPL1Q9BYD6 325 aaKnown RBP10.31□□□□□ -0.76
VPS11-208ENST00000621676 C5AR2Q9P296 337 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 KLHL3Q9UH77 587 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 TAGLN3Q9UI15 199 aa10.31□□□□□ -0.76
VPS11-208ENST00000621676 H0Y858 1186 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 PRAMEF10O60809 474 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 SDC3O75056 442 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 SOCS5O75159 536 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 C9P02748 559 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 DCNP07585 359 aaKnown RBP10.3□□□□□ -0.76
VPS11-208ENST00000621676 PTPN4P29074 926 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 MRPS22P82650 360 aaKnown RBP10.3□□□□□ -0.76
VPS11-208ENST00000621676 CYLC2Q14093 348 aaPredicted RBP10.3□□□□□ -0.76
VPS11-208ENST00000621676 LPAL2Q16609 132 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 TYSND1Q2T9J0 566 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 PGS1Q32NB8 556 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 CCDC157Q569K6 752 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 ENPP7Q6UWV6 458 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 HID1Q8IV36 788 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 IL17RCQ8NAC3 791 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 STMN2Q93045 179 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 MAGED4Q96JG8 741 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 NECAB3Q96P71 396 aaPredicted RBP10.3□□□□□ -0.76
VPS11-208ENST00000621676 MRM3Q9HC36 420 aaKnown RBP10.3□□□□□ -0.76
VPS11-208ENST00000621676 INTS10Q9NVR2 710 aaKnown RBP10.3□□□□□ -0.76
VPS11-208ENST00000621676 ZNF490Q9ULM2 529 aaPredicted RBP10.3□□□□□ -0.76
VPS11-208ENST00000621676 ALPK2Q86TB3 2170 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 PSMD12O00232 456 aaPredicted RBP10.3□□□□□ -0.76
VPS11-208ENST00000621676 TAPBPO15533 448 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 FUCA1P04066 466 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 SERPINA6P08185 405 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 DDX6P26196 483 aaKnown RBP eCLIP10.3□□□□□ -0.76
VPS11-208ENST00000621676 DRD3P35462 400 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 MAGEA12P43365 314 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 STX1BP61266 288 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 IRF8Q02556 426 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 CHIT1Q13231 466 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 RBBP5Q15291 538 aaKnown RBP10.3□□□□□ -0.76
VPS11-208ENST00000621676 RABL3Q5HYI8 236 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 IL23RQ5VWK5 629 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 ALG1LQ6GMV1 187 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 HMGN2P46Q86SG4 172 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 FAM217AQ8IXS0 508 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 PHACTR4Q8IZ21 702 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 SLC44A3Q8N4M1 653 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 OR10G6Q8NH81 332 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 INPP5DQ92835 1189 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 OTUB1Q96FW1 271 aaPredicted RBP10.3□□□□□ -0.76
VPS11-208ENST00000621676 EML4Q9HC35 981 aaKnown RBP10.3□□□□□ -0.76
VPS11-208ENST00000621676 GDE1Q9NZC3 331 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 AURKCQ9UQB9 309 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 TANC1Q9C0D5 1861 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 LAMA5O15230 3695 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 GRXCR2A6NFK2 248 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 F8W8V4 182 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 K7EQS6 105 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 KERAO60938 352 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 STK16O75716 305 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 TM7SF2O76062 418 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 RASGRP1O95267 797 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 TUBB3Q13509 450 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 RELTQ969Z4 430 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 GAS2L1Q99501 681 aaPredicted RBP10.3□□□□□ -0.76
VPS11-208ENST00000621676 PRDM8Q9NQV8 689 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 SLC7A8Q9UHI5 535 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 POLG2Q9UHN1 485 aa10.3□□□□□ -0.76
VPS11-208ENST00000621676 CEP250Q9BV73 2442 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 EDDM13A0A1B0GTR0 161 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 TXNDC9O14530 226 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 PPM1DO15297 605 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 ATP6V1G2O95670 118 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 ALPPL2P10696 532 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 G6PDP11413 515 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 MMP12P39900 470 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 MAPK9P45984 424 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 FGL2Q14314 439 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 SNCBQ16143 134 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 CYHR1Q6ZMK1 362 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 ZNF783Q6ZMS7 281 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 SLC44A2Q8IWA5 706 aaPredicted RBP10.29□□□□□ -0.76
VPS11-208ENST00000621676 SCUBE1Q8IWY4 988 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 CLYBLQ8N0X4 340 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 BTN2A2Q8WVV5 523 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 RIPOR3Q96MK2 946 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 CCDC106Q9BWC9 280 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 ELOVL6Q9H5J4 265 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 CARS2Q9HA77 564 aaKnown RBP10.29□□□□□ -0.76
VPS11-208ENST00000621676 CAPN10Q9HC96 672 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 MID2Q9UJV3 735 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 SH2B3Q9UQQ2 575 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 ARHGEF33A8MVX0 844 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 ADAM23O75077 832 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 EPB42P16452 691 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 NELFEP18615 380 aaKnown RBP10.29□□□□□ -0.76
VPS11-208ENST00000621676 CALB2P22676 271 aa10.29□□□□□ -0.76
VPS11-208ENST00000621676 GRIA2P42262 883 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms