RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 TMEM121BQ9BXQ6 578 aaPredicted RBP13.93□□□□□ -0.18
CBWD3-217ENST00000621474 TWSG1Q9GZX9 223 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 RHOJQ9H4E5 214 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 MVB12BQ9H7P6 319 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 CORO1CQ9ULV4 474 aaPredicted RBP13.93□□□□□ -0.18
CBWD3-217ENST00000621474 NEUROG3Q9Y4Z2 214 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 COLEC10Q9Y6Z7 277 aa13.93□□□□□ -0.18
CBWD3-217ENST00000621474 MN1Q10571 1320 aaPredicted RBP13.92□□□□□ -0.18
CBWD3-217ENST00000621474 IGHV5-10-1A0A0J9YXX1 117 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 KRT87PA6NCN2 255 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 VPS26AO75436 327 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 ACSL3O95573 720 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 TSPAN12O95859 305 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 NDUFS1P28331 727 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 CCKBRP32239 447 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 MAPK9P45984 424 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 GFERP55789 205 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 ABRQ12979 859 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 CLPPQ16740 277 aaPredicted RBP13.92□□□□□ -0.18
CBWD3-217ENST00000621474 MAP9Q49MG5 647 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 TMEM71Q6P5X7 295 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 WDR74Q6RFH5 385 aaPredicted RBP13.92□□□□□ -0.18
CBWD3-217ENST00000621474 PAQR3Q6TCH7 311 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 TMEM207Q6UWW9 146 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 CPNE9Q8IYJ1 553 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 GPATCH11Q8N954 259 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 OR4D9Q8NGE8 314 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 CDKL2Q92772 493 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 VPS39Q96JC1 886 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 DEPDC7Q96QD5 511 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 RBBP8Q99708 897 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 EPB41L4BQ9H329 900 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 NSMCE4AQ9NXX6 385 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 PDP2Q9P2J9 529 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 TSR3Q9UJK0 312 aaKnown RBP13.92□□□□□ -0.18
CBWD3-217ENST00000621474 ICKQ9UPZ9 632 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 VWA7Q9Y334 891 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 MSRB2Q9Y3D2 182 aa13.92□□□□□ -0.18
CBWD3-217ENST00000621474 FAM95CA0A1B0GW59 222 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 PMS2P1A4D2B8 440 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 ZW10O43264 779 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 C1orf105O95561 183 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 C9P02748 559 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 PROS1P07225 676 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 THRAP10827 490 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 MCM3P25205 808 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 MPSTP25325 297 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 LIMK2P53671 638 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 PLCL1Q15111 1095 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 CCSMST1Q4G0I0 132 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 FAM45BPQ6NSW5 357 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 UNC5DQ6UXZ4 953 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 CEP128Q6ZU80 1094 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 CEP97Q8IW35 865 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 CFAP61Q8NHU2 1237 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 FAM45AQ8TCE6 357 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 NCSTNQ92542 709 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 INPP5DQ92835 1189 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 AHCYL2Q96HN2 611 aaKnown RBP13.91□□□□□ -0.18
CBWD3-217ENST00000621474 CPNE1Q99829 537 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 RAB33BQ9H082 229 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 EPB41L1Q9H4G0 881 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 TFB2MQ9H5Q4 396 aaKnown RBP13.91□□□□□ -0.18
CBWD3-217ENST00000621474 ACSS3Q9H6R3 686 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 TAS2R13Q9NYV9 303 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.91□□□□□ -0.18
CBWD3-217ENST00000621474 ANGPTL2Q9UKU9 493 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 PLAGL1Q9UM63 463 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 MTO1Q9Y2Z2 717 aaKnown RBP13.91□□□□□ -0.18
CBWD3-217ENST00000621474 V9GYY5 206 aaPredicted RBP13.91□□□□□ -0.18
CBWD3-217ENST00000621474 CHD8Q9HCK8 2581 aa13.91□□□□□ -0.18
CBWD3-217ENST00000621474 OR5K3A6NET4 321 aa13.9□□□□□ -0.18
CBWD3-217ENST00000621474 WISP3O95389 354 aaPredicted RBP13.9□□□□□ -0.18
CBWD3-217ENST00000621474 GP5P40197 560 aa13.9□□□□□ -0.18
CBWD3-217ENST00000621474 BDKRB1P46663 353 aa13.9□□□□□ -0.18
CBWD3-217ENST00000621474 TAS2R39P59534 338 aa13.9□□□□□ -0.18
CBWD3-217ENST00000621474 ZNF460Q14592 562 aa13.9□□□□□ -0.18
CBWD3-217ENST00000621474 SLMAPQ14BN4 828 aa13.9□□□□□ -0.18
CBWD3-217ENST00000621474 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.9□□□□□ -0.18
CBWD3-217ENST00000621474 NEK10Q6ZWH5 1172 aa13.9□□□□□ -0.18
CBWD3-217ENST00000621474 PIWIL4Q7Z3Z4 852 aaKnown RBP13.9□□□□□ -0.18
CBWD3-217ENST00000621474 CTAGE3PQ8IX95 158 aa13.9□□□□□ -0.18
CBWD3-217ENST00000621474 PPM1NQ8N819 430 aa13.9□□□□□ -0.18
CBWD3-217ENST00000621474 RCBTB1Q8NDN9 531 aa13.9□□□□□ -0.18
CBWD3-217ENST00000621474 OR4E2Q8NGC2 313 aa13.9□□□□□ -0.18
CBWD3-217ENST00000621474 EEF1AKMT1Q8WVE0 214 aa13.9□□□□□ -0.18
CBWD3-217ENST00000621474 CCDC74BQ96LY2 380 aa13.9□□□□□ -0.18
CBWD3-217ENST00000621474 GPR22Q99680 433 aa13.9□□□□□ -0.18
CBWD3-217ENST00000621474 TRIT1Q9H3H1 467 aaKnown RBP13.9□□□□□ -0.18
CBWD3-217ENST00000621474 XKR8Q9H6D3 395 aa13.9□□□□□ -0.18
CBWD3-217ENST00000621474 EPHA6Q9UF33 1036 aa13.9□□□□□ -0.18
CBWD3-217ENST00000621474 CIDEBQ9UHD4 219 aa13.9□□□□□ -0.18
CBWD3-217ENST00000621474 TRMT6Q9UJA5 497 aaKnown RBP13.9□□□□□ -0.18
CBWD3-217ENST00000621474 PCM1Q15154 2024 aa13.9□□□□□ -0.18
CBWD3-217ENST00000621474 HMX2A2RU54 273 aa13.9□□□□□ -0.19
CBWD3-217ENST00000621474 BTN3A3O00478 584 aa13.9□□□□□ -0.19
CBWD3-217ENST00000621474 CAPN5O15484 640 aaPredicted RBP13.9□□□□□ -0.19
CBWD3-217ENST00000621474 PSIP1O75475 530 aaKnown RBP13.9□□□□□ -0.19
CBWD3-217ENST00000621474 ZNF37AP17032 561 aaPredicted RBP13.9□□□□□ -0.19
CBWD3-217ENST00000621474 SKIV2L2P42285 1042 aaKnown RBP13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms