RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 CSO75390 466 aaKnown RBP18.08■□□□□ 0.48
CIRBP-245ENST00000621399 CBSLP0DN79 551 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 MYBL2P10244 700 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 ENO3P13929 434 aaPredicted RBP18.08■□□□□ 0.48
CIRBP-245ENST00000621399 SPINK2P20155 84 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 CD9P21926 228 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 CBSP35520 551 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 PMS2P54278 862 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 PDAP1Q13442 181 aaKnown RBP18.08■□□□□ 0.48
CIRBP-245ENST00000621399 KLHL38Q2WGJ6 581 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 KLHL35Q6PF15 583 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 MARCH9Q86YJ5 346 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 SPNS2Q8IVW8 549 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 CACTIN-AS1Q8N1I8 211 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 OR4E2Q8NGC2 313 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 OR52E1Q8NGJ3 308 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 LCN9Q8WX39 176 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.08■□□□□ 0.48
CIRBP-245ENST00000621399 MRRFQ96E11 262 aaKnown RBP18.08■□□□□ 0.48
CIRBP-245ENST00000621399 VPS39Q96JC1 886 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 RBBP8Q99708 897 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 OLFM1Q99784 485 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 DPYSL5Q9BPU6 564 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 MCMBPQ9BTE3 642 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 SCNM1Q9BWG6 230 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 ACSS3Q9H6R3 686 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 OGFRQ9NZT2 677 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 KLK13Q9UKR3 277 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 WASF3Q9UPY6 502 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 RUVBL2Q9Y230 463 aaKnown RBP18.08■□□□□ 0.48
CIRBP-245ENST00000621399 MTO1Q9Y2Z2 717 aaKnown RBP18.08■□□□□ 0.48
CIRBP-245ENST00000621399 PIKFYVEQ9Y2I7 2098 aa18.08■□□□□ 0.48
CIRBP-245ENST00000621399 KDM1AO60341 852 aa18.07■□□□□ 0.48
CIRBP-245ENST00000621399 FAM155BO75949 473 aa18.07■□□□□ 0.48
CIRBP-245ENST00000621399 HOXB3P14651 431 aaPredicted RBP18.07■□□□□ 0.48
CIRBP-245ENST00000621399 FDXRP22570 491 aa18.07■□□□□ 0.48
CIRBP-245ENST00000621399 MPSTP25325 297 aa18.07■□□□□ 0.48
CIRBP-245ENST00000621399 CSF2RBP32927 897 aa18.07■□□□□ 0.48
CIRBP-245ENST00000621399 SPRP35270 261 aaPredicted RBP18.07■□□□□ 0.48
CIRBP-245ENST00000621399 RGS4P49798 205 aa18.07■□□□□ 0.48
CIRBP-245ENST00000621399 SLC12A2P55011 1212 aa18.07■□□□□ 0.48
CIRBP-245ENST00000621399 CFHR1Q03591 330 aa18.07■□□□□ 0.48
CIRBP-245ENST00000621399 ISXQ2M1V0 245 aa18.07■□□□□ 0.48
CIRBP-245ENST00000621399 TTC23LQ6PF05 361 aa18.07■□□□□ 0.48
CIRBP-245ENST00000621399 WDR74Q6RFH5 385 aaPredicted RBP18.07■□□□□ 0.48
CIRBP-245ENST00000621399 PAQR3Q6TCH7 311 aa18.07■□□□□ 0.48
CIRBP-245ENST00000621399 TMPRSS9Q7Z410 1059 aa18.07■□□□□ 0.48
CIRBP-245ENST00000621399 UHMK1Q8TAS1 419 aaKnown RBP18.07■□□□□ 0.48
CIRBP-245ENST00000621399 RSC1A1Q92681 617 aa18.07■□□□□ 0.48
CIRBP-245ENST00000621399 TMEM74Q96NL1 305 aa18.07■□□□□ 0.48
CIRBP-245ENST00000621399 FUT8Q9BYC5 575 aa18.07■□□□□ 0.48
CIRBP-245ENST00000621399 SRMSQ9H3Y6 488 aa18.07■□□□□ 0.48
CIRBP-245ENST00000621399 TFB2MQ9H5Q4 396 aaKnown RBP18.07■□□□□ 0.48
CIRBP-245ENST00000621399 NFS1Q9Y697 457 aa18.07■□□□□ 0.48
CIRBP-245ENST00000621399 RP1P56715 2156 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 A0A087WUV0 522 aaPredicted RBP18.06■□□□□ 0.48
CIRBP-245ENST00000621399 OR6C74A6NCV1 312 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 TMX2-CTNND1H3BSU7 103 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 EIF3FO00303 357 aaPredicted RBP18.06■□□□□ 0.48
CIRBP-245ENST00000621399 MATN4O95460 622 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 MPC1LP0DKB6 136 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 CAPZBP47756 277 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 PGGT1BP53609 377 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 LIMK2P53671 638 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 INHBCP55103 352 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 TAS2R39P59534 338 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 VSNL1P62760 191 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 ERCC6LQ2NKX8 1250 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 PHF19Q5T6S3 580 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 LRRC8EQ6NSJ5 796 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 TMEM71Q6P5X7 295 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 ZNF574Q6ZN55 896 aaPredicted RBP18.06■□□□□ 0.48
CIRBP-245ENST00000621399 NEK10Q6ZWH5 1172 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 B3GNT8Q7Z7M8 397 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 AMIGO1Q86WK6 493 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 PLXDC1Q8IUK5 500 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 DCUN1D3Q8IWE4 304 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 OR4D9Q8NGE8 314 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 EEF1AKMT1Q8WVE0 214 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 TXLNGYQ9BZA5 131 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 SEMA6CQ9H3T2 930 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 XKR8Q9H6D3 395 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 HRASLS2Q9NWW9 162 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 TMEM9Q9P0T7 183 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 SLC39A10Q9ULF5 831 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 NEUROG3Q9Y4Z2 214 aa18.06■□□□□ 0.48
CIRBP-245ENST00000621399 CAPN5O15484 640 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-245ENST00000621399 RIPK2O43353 540 aa18.05■□□□□ 0.48
CIRBP-245ENST00000621399 C1orf105O95561 183 aa18.05■□□□□ 0.48
CIRBP-245ENST00000621399 CCNFP41002 786 aa18.05■□□□□ 0.48
CIRBP-245ENST00000621399 PDX1P52945 283 aa18.05■□□□□ 0.48
CIRBP-245ENST00000621399 IL2P60568 153 aa18.05■□□□□ 0.48
CIRBP-245ENST00000621399 POU4F1Q01851 419 aa18.05■□□□□ 0.48
CIRBP-245ENST00000621399 ZFP36L1Q07352 338 aaKnown RBP18.05■□□□□ 0.48
CIRBP-245ENST00000621399 USP10Q14694 798 aaKnown RBP18.05■□□□□ 0.48
CIRBP-245ENST00000621399 UAP1Q16222 522 aaPredicted RBP18.05■□□□□ 0.48
CIRBP-245ENST00000621399 ARMC6Q6NXE6 501 aa18.05■□□□□ 0.48
CIRBP-245ENST00000621399 CYHR1Q6ZMK1 362 aa18.05■□□□□ 0.48
CIRBP-245ENST00000621399 PIWIL4Q7Z3Z4 852 aaKnown RBP18.05■□□□□ 0.48
CIRBP-245ENST00000621399 OOSP2Q86WS3 158 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms