RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 BTF3L4Q96K17 158 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 BIRC8Q96P09 236 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 NECAB3Q96P71 396 aaPredicted RBP7.07□□□□□ -1.28
COLCA1-205ENST00000620864 TXN2Q99757 166 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 CCDC106Q9BWC9 280 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 DLC1Q96QB1 1528 aa7.07□□□□□ -1.28
COLCA1-205ENST00000620864 ATE1O95260 518 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 SREBF1P36956 1147 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 STXBP1P61764 594 aaKnown RBP7.06□□□□□ -1.28
COLCA1-205ENST00000620864 RPL6Q02878 288 aaKnown RBP7.06□□□□□ -1.28
COLCA1-205ENST00000620864 GRB10Q13322 594 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 RNF151Q2KHN1 245 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 KLHDC10Q6PID8 442 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 TXNRD3Q86VQ6 643 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 UNC93AQ86WB7 457 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 NPAS2Q99743 824 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 BCL7BQ9BQE9 202 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 ERVK-5Q9HDB9 667 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 FAM105AQ9NUU6 356 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 FXYD6-FXYD2A0A087WZ82 144 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 EIF1AYO14602 144 aaKnown RBP7.06□□□□□ -1.28
COLCA1-205ENST00000620864 HLA-DPB1P04440 258 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 TPH1P17752 444 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 TPSB2P20231 275 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 EIF1AXP47813 144 aaKnown RBP7.06□□□□□ -1.28
COLCA1-205ENST00000620864 ZNF267Q14586 743 aaPredicted RBP7.06□□□□□ -1.28
COLCA1-205ENST00000620864 SEC23BQ15437 767 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 TPSAB1Q15661 275 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 ISLR2Q6UXK2 745 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 CUZD1Q86UP6 607 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 FAM124AQ86V42 546 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 DCAKDQ8WVC6 231 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 PRICKLE1Q96MT3 831 aaPredicted RBP7.06□□□□□ -1.28
COLCA1-205ENST00000620864 KXD1Q9BQD3 176 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 CHIAQ9BZP6 476 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 FXYD6Q9H0Q3 95 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 ATP13A3Q9H7F0 1226 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 LRTM1Q9HBL6 345 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 TRIM36Q9NQ86 728 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 SNX15Q9NRS6 342 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 NUDT4Q9NZJ9 180 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 LGALS13Q9UHV8 139 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 AIPO00170 330 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 CYP11A1P05108 521 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 CD36P16671 472 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 HOXC12P31275 282 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 RAB5CP51148 216 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 NCS1P62166 190 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 KCNC4Q03721 635 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 LPCAT4Q643R3 524 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 DNM1P34Q6PK57 102 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 TSPAN33Q86UF1 283 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 SLC41A1Q8IVJ1 513 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 BPIFB1Q8TDL5 484 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 S100A16Q96FQ6 103 aaKnown RBP7.06□□□□□ -1.28
COLCA1-205ENST00000620864 LIN37Q96GY3 246 aaPredicted RBP7.06□□□□□ -1.28
COLCA1-205ENST00000620864 PGLYRP2Q96PD5 576 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 TM9SF2Q99805 663 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 DCSTAMPQ9H295 470 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 FOLH1BQ9HBA9 442 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 ENY2Q9NPA8 101 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 PCDHB5Q9Y5E4 795 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 FAM205AQ6ZU69 1335 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 H3BRB1 525 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 H3BUI4 141 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 FPGTO14772 594 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 SLITRK5O94991 958 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 CSF1RP07333 972 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 GTF2F2P13984 249 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 VEGFBP49765 207 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 ZNF143P52747 638 aaPredicted RBP7.06□□□□□ -1.28
COLCA1-205ENST00000620864 PRKCDQ05655 676 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 FASTKD3Q14CZ7 662 aaKnown RBP7.06□□□□□ -1.28
COLCA1-205ENST00000620864 RBM15BQ8NDT2 890 aaKnown RBP7.06□□□□□ -1.28
COLCA1-205ENST00000620864 MFSD8Q8NHS3 518 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 ZNF563Q8TA94 476 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 SCGB1C1Q8TD33 95 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 MRPL9Q9BYD2 267 aaKnown RBP7.06□□□□□ -1.28
COLCA1-205ENST00000620864 TUT1Q9H6E5 874 aaKnown RBP7.06□□□□□ -1.28
COLCA1-205ENST00000620864 BRD9Q9H8M2 597 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 CMAHPQ9Y471 501 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 HSPB11Q9Y547 144 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 DNM1LO00429 736 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 CXCL14O95715 111 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 TXNL4AP83876 142 aaKnown RBP7.06□□□□□ -1.28
COLCA1-205ENST00000620864 SLC3A1Q07837 685 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 CRHR2Q13324 411 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 IFI44LQ53G44 452 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 RABL3Q5HYI8 236 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 UBXN11Q5T124 520 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 LRRN1Q6UXK5 716 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 UNC5AQ6ZN44 842 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 TPGS1Q6ZTW0 290 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 PGAP1Q75T13 922 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 NIPA1Q7RTP0 329 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 ANKRD23Q86SG2 305 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 ADAMTS15Q8TE58 950 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 SEMA6BQ9H3T3 888 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 GDAP2Q9NXN4 497 aa7.06□□□□□ -1.28
COLCA1-205ENST00000620864 ZNF282Q9UDV7 671 aaPredicted RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms