RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 ADGRF3Q8IZF5 1079 aa16.65■□□□□ 0.26
HMGN3-203ENST00000620514 CARFQ8N187 725 aa16.65■□□□□ 0.26
HMGN3-203ENST00000620514 PPHLN1Q8NEY8 458 aaKnown RBP16.65■□□□□ 0.26
HMGN3-203ENST00000620514 LKAAEAR1Q8TD35 194 aa16.65■□□□□ 0.26
HMGN3-203ENST00000620514 CHRAC1Q9NRG0 131 aa16.65■□□□□ 0.26
HMGN3-203ENST00000620514 KCND1Q9NSA2 647 aa16.65■□□□□ 0.26
HMGN3-203ENST00000620514 MARCH4Q9P2E8 410 aaPredicted RBP16.65■□□□□ 0.26
HMGN3-203ENST00000620514 ASF1AQ9Y294 204 aa16.65■□□□□ 0.26
HMGN3-203ENST00000620514 MATN2O00339 956 aa16.64■□□□□ 0.25
HMGN3-203ENST00000620514 SCRG1O75711 98 aa16.64■□□□□ 0.25
HMGN3-203ENST00000620514 TPBGLP0DKB5 382 aa16.64■□□□□ 0.25
HMGN3-203ENST00000620514 PRAMEP78395 509 aa16.64■□□□□ 0.25
HMGN3-203ENST00000620514 ABRQ12979 859 aa16.64■□□□□ 0.25
HMGN3-203ENST00000620514 SYTL3Q4VX76 610 aa16.64■□□□□ 0.25
HMGN3-203ENST00000620514 FASTKD1Q53R41 847 aaKnown RBP16.64■□□□□ 0.25
HMGN3-203ENST00000620514 PCID2Q5JVF3 399 aa16.64■□□□□ 0.25
HMGN3-203ENST00000620514 NLRP9Q7RTR0 991 aa16.64■□□□□ 0.25
HMGN3-203ENST00000620514 GSTA5Q7RTV2 222 aa16.64■□□□□ 0.25
HMGN3-203ENST00000620514 TMEM126BQ8IUX1 230 aa16.64■□□□□ 0.25
HMGN3-203ENST00000620514 SLC38A9Q8NBW4 561 aa16.64■□□□□ 0.25
HMGN3-203ENST00000620514 TRIM58Q8NG06 486 aa16.64■□□□□ 0.25
HMGN3-203ENST00000620514 PITPNM3Q9BZ71 974 aa16.64■□□□□ 0.25
HMGN3-203ENST00000620514 EIF2B3Q9NR50 452 aaKnown RBP16.64■□□□□ 0.25
HMGN3-203ENST00000620514 ACTR10Q9NZ32 417 aa16.64■□□□□ 0.25
HMGN3-203ENST00000620514 KCND3Q9UK17 655 aa16.64■□□□□ 0.25
HMGN3-203ENST00000620514 PPP2R2CQ9Y2T4 447 aa16.64■□□□□ 0.25
HMGN3-203ENST00000620514 PCDHGA6Q9Y5G7 932 aa16.64■□□□□ 0.25
HMGN3-203ENST00000620514 BOD1L1Q8NFC6 3051 aa16.63■□□□□ 0.25
HMGN3-203ENST00000620514 SPTA1P02549 2419 aa16.63■□□□□ 0.25
HMGN3-203ENST00000620514 CDC14CA4D256 554 aa16.63■□□□□ 0.25
HMGN3-203ENST00000620514 IQCF5A8MTL0 148 aa16.63■□□□□ 0.25
HMGN3-203ENST00000620514 C2orf74A8MZ97 194 aa16.63■□□□□ 0.25
HMGN3-203ENST00000620514 CPNE3O75131 537 aaKnown RBP16.63■□□□□ 0.25
HMGN3-203ENST00000620514 ATXN8OSP0DMR3 200 aa16.63■□□□□ 0.25
HMGN3-203ENST00000620514 CCR7P32248 378 aa16.63■□□□□ 0.25
HMGN3-203ENST00000620514 TERF1P54274 439 aa16.63■□□□□ 0.25
HMGN3-203ENST00000620514 RPS18P62269 152 aaKnown RBP16.63■□□□□ 0.25
HMGN3-203ENST00000620514 GPS2Q13227 327 aa16.63■□□□□ 0.25
HMGN3-203ENST00000620514 UNC5AQ6ZN44 842 aa16.63■□□□□ 0.25
HMGN3-203ENST00000620514 TRIM73Q86UV7 250 aa16.63■□□□□ 0.25
HMGN3-203ENST00000620514 PTRH1Q86Y79 214 aaKnown RBP16.63■□□□□ 0.25
HMGN3-203ENST00000620514 PRELID2Q8N945 189 aa16.63■□□□□ 0.25
HMGN3-203ENST00000620514 OR1L3Q8NH93 324 aa16.63■□□□□ 0.25
HMGN3-203ENST00000620514 APOBEC4Q8WW27 367 aaKnown RBP16.63■□□□□ 0.25
HMGN3-203ENST00000620514 MAIP1Q8WWC4 291 aa16.63■□□□□ 0.25
HMGN3-203ENST00000620514 TRAPPC9Q96Q05 1148 aa16.63■□□□□ 0.25
HMGN3-203ENST00000620514 TTC1Q99614 292 aa16.63■□□□□ 0.25
HMGN3-203ENST00000620514 TRIM4Q9C037 500 aa16.63■□□□□ 0.25
HMGN3-203ENST00000620514 PLAGL1Q9UM63 463 aa16.63■□□□□ 0.25
HMGN3-203ENST00000620514 ZKSCAN5Q9Y2L8 839 aa16.63■□□□□ 0.25
HMGN3-203ENST00000620514 TDRKHQ9Y2W6 561 aaKnown RBP16.63■□□□□ 0.25
HMGN3-203ENST00000620514 PCDHB3Q9Y5E6 796 aa16.63■□□□□ 0.25
HMGN3-203ENST00000620514 BSNQ9UPA5 3926 aa16.63■□□□□ 0.25
HMGN3-203ENST00000620514 TCRBV7S3A2A0A539 114 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 PIPSLA2A3N6 862 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 C21orf140B9A014 251 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 TMEM150CB9EJG8 249 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 SUV39H1O43463 412 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 CREG1O75629 220 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 NMBRP28336 390 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 TRIP13Q15645 432 aaPredicted RBP16.62■□□□□ 0.25
HMGN3-203ENST00000620514 ZNF789Q5FWF6 425 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 LCN10Q6JVE6 187 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 VRK3Q8IV63 474 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 TBC1D21Q8IYX1 336 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 KRT222Q8N1A0 295 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 OR8K5Q8NH50 307 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 PEX13Q92968 403 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 MR1Q95460 341 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 SGSM3Q96HU1 749 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 TWSG1Q9GZX9 223 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 ACTL8Q9H568 366 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 ZNF71Q9NQZ8 489 aaPredicted RBP16.62■□□□□ 0.25
HMGN3-203ENST00000620514 LATS2Q9NRM7 1088 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 TREX1Q9NSU2 369 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 CATSPERZQ9NTU4 200 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 SPHK1Q9NYA1 384 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 TUBD1Q9UJT1 453 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 TTC7AQ9ULT0 858 aaPredicted RBP16.62■□□□□ 0.25
HMGN3-203ENST00000620514 CDYLQ9Y232 598 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 KCNMB2Q9Y691 235 aa16.62■□□□□ 0.25
HMGN3-203ENST00000620514 SPTBP11277 2137 aa16.61■□□□□ 0.25
HMGN3-203ENST00000620514 CD3EAPO15446 510 aaKnown RBP16.61■□□□□ 0.25
HMGN3-203ENST00000620514 UGT2B7P16662 529 aa16.61■□□□□ 0.25
HMGN3-203ENST00000620514 MGAT1P26572 445 aa16.61■□□□□ 0.25
HMGN3-203ENST00000620514 SHMT2P34897 504 aa16.61■□□□□ 0.25
HMGN3-203ENST00000620514 NPY2RP49146 381 aa16.61■□□□□ 0.25
HMGN3-203ENST00000620514 PLOD1Q02809 727 aaPredicted RBP16.61■□□□□ 0.25
HMGN3-203ENST00000620514 HSPA14Q0VDF9 509 aa16.61■□□□□ 0.25
HMGN3-203ENST00000620514 PLEKHS1Q5SXH7 462 aa16.61■□□□□ 0.25
HMGN3-203ENST00000620514 SPESP1Q6UW49 350 aa16.61■□□□□ 0.25
HMGN3-203ENST00000620514 CES3Q6UWW8 571 aa16.61■□□□□ 0.25
HMGN3-203ENST00000620514 C4orf22Q6V702 233 aa16.61■□□□□ 0.25
HMGN3-203ENST00000620514 CDHR3Q6ZTQ4 885 aa16.61■□□□□ 0.25
HMGN3-203ENST00000620514 OR5K2Q8NHB8 316 aa16.61■□□□□ 0.25
HMGN3-203ENST00000620514 ABHD17AQ96GS6 310 aa16.61■□□□□ 0.25
HMGN3-203ENST00000620514 OR2A14Q96R47 310 aa16.61■□□□□ 0.25
HMGN3-203ENST00000620514 AP1M1Q9BXS5 423 aa16.61■□□□□ 0.25
HMGN3-203ENST00000620514 CHST8Q9H2A9 424 aa16.61■□□□□ 0.25
HMGN3-203ENST00000620514 FANCEQ9HB96 536 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms