RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 GSDMDP57764 484 aa2.4□□□□□ -2.03
TARDBP-220ENST00000618606 SNX30Q5VWJ9 437 aa2.4□□□□□ -2.03
TARDBP-220ENST00000618606 ENOSF1Q7L5Y1 443 aa2.4□□□□□ -2.03
TARDBP-220ENST00000618606 HIST3H2AQ7L7L0 130 aa2.4□□□□□ -2.03
TARDBP-220ENST00000618606 PIGZQ86VD9 579 aa2.4□□□□□ -2.03
TARDBP-220ENST00000618606 MARVELD2Q8N4S9 558 aa2.4□□□□□ -2.03
TARDBP-220ENST00000618606 SUSD6Q92537 303 aa2.4□□□□□ -2.03
TARDBP-220ENST00000618606 RASL10AQ92737 203 aa2.4□□□□□ -2.03
TARDBP-220ENST00000618606 SMARCE1Q969G3 411 aa2.4□□□□□ -2.03
TARDBP-220ENST00000618606 SGK494Q96LW2 274 aa2.4□□□□□ -2.03
TARDBP-220ENST00000618606 C7orf26Q96N11 449 aa2.4□□□□□ -2.03
TARDBP-220ENST00000618606 SOSTQ9BQB4 213 aa2.4□□□□□ -2.03
TARDBP-220ENST00000618606 FUCA2Q9BTY2 467 aa2.4□□□□□ -2.03
TARDBP-220ENST00000618606 RAB11FIP5Q9BXF6 653 aa2.4□□□□□ -2.03
TARDBP-220ENST00000618606 PITPNM3Q9BZ71 974 aa2.4□□□□□ -2.03
TARDBP-220ENST00000618606 TAS2R10Q9NYW0 307 aa2.4□□□□□ -2.03
TARDBP-220ENST00000618606 TBC1D29Q9UFV1 150 aa2.4□□□□□ -2.03
TARDBP-220ENST00000618606 R3HDM2Q9Y2K5 976 aaKnown RBP2.4□□□□□ -2.03
TARDBP-220ENST00000618606 PIAS3Q9Y6X2 628 aa2.4□□□□□ -2.03
TARDBP-220ENST00000618606 COL4A4P53420 1690 aaPredicted RBP2.4□□□□□ -2.03
TARDBP-220ENST00000618606 IGLV3-10A0A075B6K4 115 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 PI4KAP2A4QPH2 592 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 SYNDIG1LA6NDD5 238 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 NPIPB15A6NHN6 443 aaPredicted RBP2.39□□□□□ -2.03
TARDBP-220ENST00000618606 KLLNB2CW77 178 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 F5H0A9 414 aaPredicted RBP2.39□□□□□ -2.03
TARDBP-220ENST00000618606 BCL2L11O43521 198 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 PTP4A3O75365 173 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 GPIP06744 558 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 EFNA1P20827 205 aaPredicted RBP2.39□□□□□ -2.03
TARDBP-220ENST00000618606 CDC25CP30307 473 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 ACTN2P35609 894 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 KRT20P35900 424 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 HARS2P49590 506 aaKnown RBP2.39□□□□□ -2.03
TARDBP-220ENST00000618606 LIMK2P53671 638 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 HUNKP57058 714 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 MS4A2Q01362 244 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 TFAP4Q01664 338 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 CEBPZQ03701 1054 aaKnown RBP2.39□□□□□ -2.03
TARDBP-220ENST00000618606 TBCEQ15813 527 aaPredicted RBP2.39□□□□□ -2.03
TARDBP-220ENST00000618606 MEP1AQ16819 746 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 HLA-BQ31612 363 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 ZDHHC20Q5W0Z9 365 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 CORO6Q6QEF8 472 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 ARMC8Q8IUR7 673 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 LSMEM1Q8N8F7 131 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 TMEM116Q8NCL8 245 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 OR1J1Q8NGS3 322 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 OR4C3Q8NH37 302 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 DYRK2Q92630 601 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 MYADMQ96S97 322 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 NUDT16L1Q9BRJ7 211 aaKnown RBP2.39□□□□□ -2.03
TARDBP-220ENST00000618606 WWTR1Q9GZV5 400 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 UPF3AQ9H1J1 476 aaKnown RBP2.39□□□□□ -2.03
TARDBP-220ENST00000618606 GHITMQ9H3K2 345 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 SLA2Q9H6Q3 261 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 ATP13A3Q9H7F0 1226 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 MAN1B1Q9UKM7 699 aa2.39□□□□□ -2.03
TARDBP-220ENST00000618606 A0A1W2PN81 502 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 NDUFS3O75489 264 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 NXPH2O95156 264 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 CLDN1O95832 211 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 ACP2P11117 423 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 AKR1B1P15121 316 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 RBMS1P29558 406 aaKnown RBP2.38□□□□□ -2.03
TARDBP-220ENST00000618606 HOXD13P35453 343 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 CHRNA7P36544 502 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 MSH2P43246 934 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 GSCP56915 257 aaPredicted RBP2.38□□□□□ -2.03
TARDBP-220ENST00000618606 SETQ01105 290 aaPredicted RBP2.38□□□□□ -2.03
TARDBP-220ENST00000618606 POU5F1Q01860 360 aaKnown RBP2.38□□□□□ -2.03
TARDBP-220ENST00000618606 LRMPQ12912 555 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 C1QTNF12Q5T7M4 302 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 WLSQ5T9L3 541 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 LINGO4Q6UY18 593 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 TMTC3Q6ZXV5 915 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 PXKQ7Z7A4 578 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 CPLX4Q7Z7G2 160 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 ADIPOR2Q86V24 386 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 GALNT13Q8IUC8 556 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 ZNF584Q8IVC4 421 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 CNTROBQ8N137 903 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 SLC39A11Q8N1S5 342 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 MAPKAPK5-AS1Q8N8E1 139 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 OR5AP2Q8NGF4 316 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 ZPLD1Q8TCW7 415 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 SNRNP27Q8WVK2 155 aaKnown RBP2.38□□□□□ -2.03
TARDBP-220ENST00000618606 SLCO2A1Q92959 643 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 TREX2Q9BQ50 279 aaPredicted RBP2.38□□□□□ -2.03
TARDBP-220ENST00000618606 ITPAQ9BY32 194 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 POLR1BQ9H9Y6 1135 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 HAUS2Q9NVX0 235 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 ADD3Q9UEY8 706 aaKnown RBP2.38□□□□□ -2.03
TARDBP-220ENST00000618606 FBXL17Q9UF56 701 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 RARRES3Q9UL19 164 aa2.38□□□□□ -2.03
TARDBP-220ENST00000618606 RSF1Q96T23 1441 aaPredicted RBP2.37□□□□□ -2.03
TARDBP-220ENST00000618606 P4HA2O15460 535 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 PRKRAO75569 313 aaKnown RBP2.37□□□□□ -2.03
TARDBP-220ENST00000618606 TMEM63AO94886 807 aa2.37□□□□□ -2.03
TARDBP-220ENST00000618606 IGHV3-13P01766 116 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms